Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
ATF3P18847 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ATF3P18847 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ATF3P18847 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ATF3P18847 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ATF3P18847 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
ATF3P18847 AC068870.3-201ENST00000625077 2536 ntBASIC6.54□□□□□ -1.36
ATF3P18847 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ATF3P18847 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC6.54□□□□□ -1.36
ATF3P18847 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.54□□□□□ -1.36
ATF3P18847 ST7-212ENST00000422922 1887 ntTSL 5 BASIC6.54□□□□□ -1.36
ATF3P18847 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
ATF3P18847 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC6.54□□□□□ -1.36
ATF3P18847 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
ATF3P18847 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.54□□□□□ -1.36
ATF3P18847 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
ATF3P18847 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
ATF3P18847 SNORA70.4-201ENST00000365509 134 ntBASIC6.54□□□□□ -1.36
ATF3P18847 RNU6-532P-201ENST00000384318 107 ntBASIC6.54□□□□□ -1.36
ATF3P18847 SNORA11F-201ENST00000408237 128 ntBASIC6.54□□□□□ -1.36
ATF3P18847 RNA5SP44-201ENST00000410446 133 ntBASIC6.54□□□□□ -1.36
ATF3P18847 UBE2V1P11-201ENST00000411559 285 ntBASIC6.54□□□□□ -1.36
ATF3P18847 AC069282.1-201ENST00000411911 526 ntBASIC6.54□□□□□ -1.36
ATF3P18847 BX664727.1-201ENST00000416024 466 ntBASIC6.54□□□□□ -1.36
ATF3P18847 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC6.54□□□□□ -1.36
ATF3P18847 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC6.54□□□□□ -1.36
ATF3P18847 HSFY6P-201ENST00000445573 403 ntBASIC6.54□□□□□ -1.36
ATF3P18847 RPL6P5-201ENST00000445678 828 ntBASIC6.54□□□□□ -1.36
ATF3P18847 HMGN1P5-201ENST00000448591 263 ntBASIC6.54□□□□□ -1.36
ATF3P18847 UQCRHP4-201ENST00000471686 272 ntBASIC6.54□□□□□ -1.36
ATF3P18847 RPL36AP41-201ENST00000493820 306 ntBASIC6.54□□□□□ -1.36
ATF3P18847 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ATF3P18847 AC111000.6-201ENST00000514471 709 ntBASIC6.54□□□□□ -1.36
ATF3P18847 SNORA31.13-201ENST00000516624 135 ntBASIC6.54□□□□□ -1.36
ATF3P18847 AC023632.4-201ENST00000517783 191 ntBASIC6.54□□□□□ -1.36
ATF3P18847 AP003730.1-201ENST00000524605 285 ntBASIC6.54□□□□□ -1.36
ATF3P18847 OR8Q1P-201ENST00000526467 655 ntBASIC6.54□□□□□ -1.36
ATF3P18847 MIR4444-1-201ENST00000581696 74 ntBASIC6.54□□□□□ -1.36
ATF3P18847 AC124283.4-201ENST00000581815 456 ntBASIC6.54□□□□□ -1.36
ATF3P18847 MIR4444-2-201ENST00000584390 74 ntBASIC6.54□□□□□ -1.36
ATF3P18847 AL591034.3-201ENST00000605511 685 ntBASIC6.54□□□□□ -1.36
ATF3P18847 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ATF3P18847 AC008759.3-201ENST00000613300 508 ntBASIC6.54□□□□□ -1.36
ATF3P18847 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
ATF3P18847 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ATF3P18847 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC6.54□□□□□ -1.36
ATF3P18847 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
ATF3P18847 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
ATF3P18847 GVINP1-202ENST00000531871 7271 ntBASIC6.54□□□□□ -1.36
ATF3P18847 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ATF3P18847 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.53□□□□□ -1.36
ATF3P18847 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.53□□□□□ -1.36
ATF3P18847 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ATF3P18847 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
ATF3P18847 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC6.53□□□□□ -1.36
ATF3P18847 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ATF3P18847 RNU6-666P-201ENST00000363499 107 ntBASIC6.53□□□□□ -1.36
ATF3P18847 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
ATF3P18847 RNA5SP498-201ENST00000411342 120 ntBASIC6.53□□□□□ -1.36
ATF3P18847 RPL23AP26-201ENST00000412728 464 ntBASIC6.53□□□□□ -1.36
ATF3P18847 OR13Z1P-201ENST00000416141 834 ntBASIC6.53□□□□□ -1.36
ATF3P18847 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC6.53□□□□□ -1.36
ATF3P18847 PNRC2P1-201ENST00000423940 420 ntBASIC6.53□□□□□ -1.36
ATF3P18847 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.53□□□□□ -1.36
ATF3P18847 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ATF3P18847 AC011998.1-201ENST00000433403 117 ntBASIC6.53□□□□□ -1.36
ATF3P18847 FTH1P16-201ENST00000435241 552 ntBASIC6.53□□□□□ -1.36
ATF3P18847 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ATF3P18847 AC069540.1-201ENST00000446320 988 ntBASIC6.53□□□□□ -1.36
ATF3P18847 RPS20P4-201ENST00000461659 355 ntBASIC6.53□□□□□ -1.36
ATF3P18847 RPS7P7-201ENST00000463499 571 ntBASIC6.53□□□□□ -1.36
ATF3P18847 CYCSP20-201ENST00000473154 315 ntBASIC6.53□□□□□ -1.36
ATF3P18847 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC6.53□□□□□ -1.36
ATF3P18847 AC021193.1-201ENST00000511607 420 ntBASIC6.53□□□□□ -1.36
ATF3P18847 AC133963.2-201ENST00000513686 578 ntBASIC6.53□□□□□ -1.36
ATF3P18847 RNU6-1004P-201ENST00000516584 111 ntBASIC6.53□□□□□ -1.36
ATF3P18847 Y_RNA.719-201ENST00000517156 106 ntBASIC6.53□□□□□ -1.36
ATF3P18847 AP003355.1-201ENST00000518956 587 ntBASIC6.53□□□□□ -1.36
ATF3P18847 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC6.53□□□□□ -1.36
ATF3P18847 RN7SL176P-201ENST00000580352 264 ntBASIC6.53□□□□□ -1.36
ATF3P18847 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC6.53□□□□□ -1.36
ATF3P18847 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC6.53□□□□□ -1.36
ATF3P18847 OR7A19P-201ENST00000608051 733 ntBASIC6.53□□□□□ -1.36
ATF3P18847 MIR6133-201ENST00000617057 108 ntBASIC6.53□□□□□ -1.36
ATF3P18847 AP004607.9-201ENST00000618202 316 ntBASIC6.53□□□□□ -1.36
ATF3P18847 AL356863.1-201ENST00000623378 1080 ntBASIC6.53□□□□□ -1.36
ATF3P18847 AC145207.9-201ENST00000623802 325 ntBASIC6.53□□□□□ -1.36
ATF3P18847 MTCO1P7-201ENST00000419523 1542 ntBASIC6.53□□□□□ -1.36
ATF3P18847 HSPA8P19-201ENST00000505359 1517 ntBASIC6.53□□□□□ -1.36
ATF3P18847 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ATF3P18847 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC6.53□□□□□ -1.36
ATF3P18847 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC6.53□□□□□ -1.36
ATF3P18847 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
ATF3P18847 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ATF3P18847 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ATF3P18847 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ATF3P18847 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
ATF3P18847 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ATF3P18847 AC108467.2-201ENST00000617640 1597 ntBASIC6.52□□□□□ -1.36
ATF3P18847 AC026523.2-201ENST00000625039 7739 ntBASIC6.52□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms