Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.27□□□□□ -1.57
MMP3P08254 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
MMP3P08254 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
MMP3P08254 AL627171.1-201ENST00000618845 1308 ntBASIC5.26□□□□□ -1.57
MMP3P08254 AC092451.3-201ENST00000625067 1343 ntBASIC5.26□□□□□ -1.57
MMP3P08254 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
MMP3P08254 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.26□□□□□ -1.57
MMP3P08254 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
MMP3P08254 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.26□□□□□ -1.57
MMP3P08254 RSL24D1P6-201ENST00000426934 401 ntBASIC5.26□□□□□ -1.57
MMP3P08254 MTATP6P17-201ENST00000431030 672 ntBASIC5.26□□□□□ -1.57
MMP3P08254 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC5.26□□□□□ -1.57
MMP3P08254 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.26□□□□□ -1.57
MMP3P08254 AC006994.1-201ENST00000438212 839 ntBASIC5.26□□□□□ -1.57
MMP3P08254 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.26□□□□□ -1.57
MMP3P08254 H2AFZP5-201ENST00000446960 382 ntBASIC5.26□□□□□ -1.57
MMP3P08254 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.26□□□□□ -1.57
MMP3P08254 OFD1P3Y-201ENST00000453312 783 ntBASIC5.26□□□□□ -1.57
MMP3P08254 Z95152.1-201ENST00000453556 656 ntBASIC5.26□□□□□ -1.57
MMP3P08254 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC5.26□□□□□ -1.57
MMP3P08254 RPL7AP10-201ENST00000481016 791 ntBASIC5.26□□□□□ -1.57
MMP3P08254 SUMO1P1-201ENST00000497904 306 ntBASIC5.26□□□□□ -1.57
MMP3P08254 TRAV31-201ENST00000502780 342 ntBASIC5.26□□□□□ -1.57
MMP3P08254 AC083829.1-201ENST00000503756 657 ntBASIC5.26□□□□□ -1.57
MMP3P08254 AC118282.1-201ENST00000506408 765 ntBASIC5.26□□□□□ -1.57
MMP3P08254 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
MMP3P08254 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC5.26□□□□□ -1.57
MMP3P08254 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
MMP3P08254 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.26□□□□□ -1.57
MMP3P08254 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.26□□□□□ -1.57
MMP3P08254 AC006349.1-201ENST00000555526 235 ntBASIC5.26□□□□□ -1.57
MMP3P08254 AC084783.1-201ENST00000565846 910 ntBASIC5.26□□□□□ -1.57
MMP3P08254 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
MMP3P08254 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.26□□□□□ -1.57
MMP3P08254 AC011492.1-201ENST00000600023 315 ntBASIC5.26□□□□□ -1.57
MMP3P08254 MTCO2P22-201ENST00000603246 681 ntBASIC5.26□□□□□ -1.57
MMP3P08254 AC005191.1-201ENST00000603950 358 ntBASIC5.26□□□□□ -1.57
MMP3P08254 AL133338.2-201ENST00000604292 736 ntBASIC5.26□□□□□ -1.57
MMP3P08254 AL590392.1-201ENST00000604960 446 ntBASIC5.26□□□□□ -1.57
MMP3P08254 MLECP1-201ENST00000615893 709 ntBASIC5.26□□□□□ -1.57
MMP3P08254 AC109809.1-201ENST00000619665 545 ntBASIC5.26□□□□□ -1.57
MMP3P08254 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
MMP3P08254 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.26□□□□□ -1.57
MMP3P08254 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
MMP3P08254 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
MMP3P08254 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.26□□□□□ -1.57
MMP3P08254 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
MMP3P08254 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
MMP3P08254 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
MMP3P08254 MAPK10-328ENST00000641553 4009 ntBASIC5.26□□□□□ -1.57
MMP3P08254 ZNF137P-201ENST00000456718 1920 ntBASIC5.25□□□□□ -1.57
MMP3P08254 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
MMP3P08254 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.25□□□□□ -1.57
MMP3P08254 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.25□□□□□ -1.57
MMP3P08254 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
MMP3P08254 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
MMP3P08254 AL672167.2-201ENST00000377164 879 ntBASIC5.25□□□□□ -1.57
MMP3P08254 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
MMP3P08254 RNU6-481P-201ENST00000384194 107 ntBASIC5.25□□□□□ -1.57
MMP3P08254 RNU6-1257P-201ENST00000384625 110 ntBASIC5.25□□□□□ -1.57
MMP3P08254 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.25□□□□□ -1.57
MMP3P08254 AL590762.2-201ENST00000395798 571 ntBASIC5.25□□□□□ -1.57
MMP3P08254 RPL26P37-201ENST00000411983 438 ntBASIC5.25□□□□□ -1.57
MMP3P08254 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.25□□□□□ -1.57
MMP3P08254 AL034379.1-201ENST00000423216 253 ntBASIC5.25□□□□□ -1.57
MMP3P08254 RPL12P18-201ENST00000437175 325 ntBASIC5.25□□□□□ -1.57
MMP3P08254 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.25□□□□□ -1.57
MMP3P08254 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.25□□□□□ -1.57
MMP3P08254 RPL5P13-201ENST00000462840 709 ntBASIC5.25□□□□□ -1.57
MMP3P08254 AC104164.3-201ENST00000467363 1258 ntBASIC5.25□□□□□ -1.57
MMP3P08254 CYCSP20-201ENST00000473154 315 ntBASIC5.25□□□□□ -1.57
MMP3P08254 AL161747.1-201ENST00000480068 358 ntBASIC5.25□□□□□ -1.57
MMP3P08254 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.25□□□□□ -1.57
MMP3P08254 AC091544.1-201ENST00000484702 348 ntBASIC5.25□□□□□ -1.57
MMP3P08254 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.25□□□□□ -1.57
MMP3P08254 UBE2V1P12-201ENST00000503954 474 ntBASIC5.25□□□□□ -1.57
MMP3P08254 AC097486.1-201ENST00000515331 210 ntBASIC5.25□□□□□ -1.57
MMP3P08254 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.25□□□□□ -1.57
MMP3P08254 MTND1P24-201ENST00000552175 861 ntBASIC5.25□□□□□ -1.57
MMP3P08254 AC023825.1-201ENST00000566704 1030 ntBASIC5.25□□□□□ -1.57
MMP3P08254 AC078880.5-201ENST00000617845 421 ntBASIC5.25□□□□□ -1.57
MMP3P08254 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.25□□□□□ -1.57
MMP3P08254 U3.53-201ENST00000628922 216 ntBASIC5.25□□□□□ -1.57
MMP3P08254 MIR6830-201ENST00000636015 70 ntBASIC5.25□□□□□ -1.57
MMP3P08254 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
MMP3P08254 AC013437.2-201ENST00000639587 677 ntBASIC5.25□□□□□ -1.57
MMP3P08254 OR52H1-202ENST00000641796 1061 ntBASIC5.25□□□□□ -1.57
MMP3P08254 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
MMP3P08254 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
MMP3P08254 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.25□□□□□ -1.57
MMP3P08254 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
MMP3P08254 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.25□□□□□ -1.57
MMP3P08254 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
MMP3P08254 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.24□□□□□ -1.57
MMP3P08254 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
MMP3P08254 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
MMP3P08254 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
MMP3P08254 OR14L1P-202ENST00000641545 3009 ntBASIC5.24□□□□□ -1.57
MMP3P08254 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.24□□□□□ -1.57
MMP3P08254 AC092111.2-201ENST00000611627 1414 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms