Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 BNIP3P41-201ENST00000503774 571 ntBASIC4.29□□□□□ -1.72
HLA-DQB2P05538 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DQB2P05538 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.29□□□□□ -1.72
HLA-DQB2P05538 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DQB2P05538 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DQB2P05538 TVP23BP1-201ENST00000557500 617 ntBASIC4.29□□□□□ -1.72
HLA-DQB2P05538 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.29□□□□□ -1.72
HLA-DQB2P05538 AL161729.3-201ENST00000603533 673 ntBASIC4.29□□□□□ -1.72
HLA-DQB2P05538 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.29□□□□□ -1.72
HLA-DQB2P05538 AC064801.1-201ENST00000612025 407 ntBASIC4.29□□□□□ -1.72
HLA-DQB2P05538 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.29□□□□□ -1.72
HLA-DQB2P05538 AC138907.10-201ENST00000623708 983 ntBASIC4.29□□□□□ -1.72
HLA-DQB2P05538 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DQB2P05538 MAPK10-349ENST00000641767 3661 ntBASIC4.29□□□□□ -1.72
HLA-DQB2P05538 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DQB2P05538 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DQB2P05538 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.29□□□□□ -1.72
HLA-DQB2P05538 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DQB2P05538 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
HLA-DQB2P05538 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DQB2P05538 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
HLA-DQB2P05538 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DQB2P05538 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
HLA-DQB2P05538 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DQB2P05538 RNU1-108P-201ENST00000362556 161 ntBASIC4.28□□□□□ -1.72
HLA-DQB2P05538 RNA5SP366-201ENST00000365454 123 ntBASIC4.28□□□□□ -1.72
HLA-DQB2P05538 RPL23AP26-201ENST00000412728 464 ntBASIC4.28□□□□□ -1.72
HLA-DQB2P05538 FAR2P2-201ENST00000413041 594 ntBASIC4.28□□□□□ -1.72
HLA-DQB2P05538 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.28□□□□□ -1.72
HLA-DQB2P05538 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.28□□□□□ -1.72
HLA-DQB2P05538 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DQB2P05538 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.28□□□□□ -1.72
HLA-DQB2P05538 FAR2P4-202ENST00000425399 584 ntBASIC4.28□□□□□ -1.72
HLA-DQB2P05538 AC016712.1-201ENST00000431088 378 ntBASIC4.28□□□□□ -1.72
HLA-DQB2P05538 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.28□□□□□ -1.72
HLA-DQB2P05538 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.28□□□□□ -1.72
HLA-DQB2P05538 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.28□□□□□ -1.72
HLA-DQB2P05538 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.28□□□□□ -1.72
HLA-DQB2P05538 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DQB2P05538 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.28□□□□□ -1.72
HLA-DQB2P05538 RPL7AP52-201ENST00000458096 790 ntBASIC4.28□□□□□ -1.72
HLA-DQB2P05538 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DQB2P05538 AF213884.1-201ENST00000488102 463 ntBASIC4.28□□□□□ -1.72
HLA-DQB2P05538 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.28□□□□□ -1.72
HLA-DQB2P05538 AC108475.1-201ENST00000507880 950 ntBASIC4.28□□□□□ -1.72
HLA-DQB2P05538 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.28□□□□□ -1.72
HLA-DQB2P05538 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DQB2P05538 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.28□□□□□ -1.72
HLA-DQB2P05538 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.28□□□□□ -1.72
HLA-DQB2P05538 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.28□□□□□ -1.72
HLA-DQB2P05538 CYP4A43P-201ENST00000568156 121 ntBASIC4.28□□□□□ -1.72
HLA-DQB2P05538 MIR4284-201ENST00000578924 81 ntBASIC4.28□□□□□ -1.72
HLA-DQB2P05538 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.28□□□□□ -1.72
HLA-DQB2P05538 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DQB2P05538 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.28□□□□□ -1.72
HLA-DQB2P05538 AL136295.6-201ENST00000610486 658 ntBASIC4.28□□□□□ -1.72
HLA-DQB2P05538 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DQB2P05538 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
HLA-DQB2P05538 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DQB2P05538 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DQB2P05538 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.28□□□□□ -1.72
HLA-DQB2P05538 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DQB2P05538 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
HLA-DQB2P05538 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
HLA-DQB2P05538 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DQB2P05538 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
HLA-DQB2P05538 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DQB2P05538 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DQB2P05538 RNU4-44P-201ENST00000363050 141 ntBASIC4.27□□□□□ -1.73
HLA-DQB2P05538 AL139039.2-201ENST00000407436 479 ntBASIC4.27□□□□□ -1.73
HLA-DQB2P05538 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.27□□□□□ -1.73
HLA-DQB2P05538 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.27□□□□□ -1.73
HLA-DQB2P05538 GAPDHP49-201ENST00000421421 961 ntBASIC4.27□□□□□ -1.73
HLA-DQB2P05538 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DQB2P05538 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DQB2P05538 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DQB2P05538 AL591623.2-201ENST00000449978 222 ntBASIC4.27□□□□□ -1.73
HLA-DQB2P05538 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DQB2P05538 RPS20P4-201ENST00000461659 355 ntBASIC4.27□□□□□ -1.73
HLA-DQB2P05538 AC093890.1-201ENST00000502554 540 ntBASIC4.27□□□□□ -1.73
HLA-DQB2P05538 KCTD9P2-201ENST00000512203 1013 ntBASIC4.27□□□□□ -1.73
HLA-DQB2P05538 RNA5SP360-201ENST00000516555 118 ntBASIC4.27□□□□□ -1.73
HLA-DQB2P05538 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.27□□□□□ -1.73
HLA-DQB2P05538 AC105233.3-201ENST00000531125 744 ntBASIC4.27□□□□□ -1.73
HLA-DQB2P05538 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.27□□□□□ -1.73
HLA-DQB2P05538 AC018552.1-201ENST00000562099 811 ntBASIC4.27□□□□□ -1.73
HLA-DQB2P05538 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.27□□□□□ -1.73
HLA-DQB2P05538 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DQB2P05538 MIR3138-201ENST00000585238 82 ntBASIC4.27□□□□□ -1.73
HLA-DQB2P05538 MIR432-201ENST00000606207 94 ntBASIC4.27□□□□□ -1.73
HLA-DQB2P05538 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.27□□□□□ -1.73
HLA-DQB2P05538 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DQB2P05538 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.27□□□□□ -1.73
HLA-DQB2P05538 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DQB2P05538 OR51C1P-202ENST00000641159 1444 ntBASIC4.27□□□□□ -1.73
HLA-DQB2P05538 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DQB2P05538 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.27□□□□□ -1.73
HLA-DQB2P05538 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
HLA-DQB2P05538 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HLA-DQB2P05538 AC011503.2-201ENST00000594230 1500 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms