Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC107398.1-201ENST00000486904 505 ntBASIC4.93□□□□□ -1.62
LDB2O43679 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.93□□□□□ -1.62
LDB2O43679 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LDB2O43679 HPRT1P1-201ENST00000509498 657 ntBASIC4.93□□□□□ -1.62
LDB2O43679 BTG4P1-201ENST00000510421 183 ntBASIC4.93□□□□□ -1.62
LDB2O43679 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.93□□□□□ -1.62
LDB2O43679 RN7SKP34-201ENST00000516142 244 ntBASIC4.93□□□□□ -1.62
LDB2O43679 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.93□□□□□ -1.62
LDB2O43679 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.93□□□□□ -1.62
LDB2O43679 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.93□□□□□ -1.62
LDB2O43679 LSM3P2-201ENST00000551246 273 ntBASIC4.93□□□□□ -1.62
LDB2O43679 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.93□□□□□ -1.62
LDB2O43679 ZNF971P-201ENST00000562068 1249 ntBASIC4.93□□□□□ -1.62
LDB2O43679 MIR4700-201ENST00000578311 74 ntBASIC4.93□□□□□ -1.62
LDB2O43679 VN1R87P-201ENST00000596706 487 ntBASIC4.93□□□□□ -1.62
LDB2O43679 AC097478.2-201ENST00000610572 514 ntBASIC4.93□□□□□ -1.62
LDB2O43679 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
LDB2O43679 AC079395.3-201ENST00000615161 484 ntBASIC4.93□□□□□ -1.62
LDB2O43679 AL353662.3-201ENST00000625131 237 ntBASIC4.93□□□□□ -1.62
LDB2O43679 AC019226.2-201ENST00000625973 424 ntBASIC4.93□□□□□ -1.62
LDB2O43679 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.93□□□□□ -1.62
LDB2O43679 MTND2P41-201ENST00000637599 773 ntBASIC4.93□□□□□ -1.62
LDB2O43679 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LDB2O43679 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
LDB2O43679 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.93□□□□□ -1.62
LDB2O43679 AL672167.1-204ENST00000641875 3017 ntBASIC4.93□□□□□ -1.62
LDB2O43679 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LDB2O43679 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
LDB2O43679 TCP11X1-202ENST00000622971 1372 ntBASIC4.92□□□□□ -1.62
LDB2O43679 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
LDB2O43679 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
LDB2O43679 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
LDB2O43679 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.92□□□□□ -1.62
LDB2O43679 MFSD8-220ENST00000641243 1422 ntBASIC4.92□□□□□ -1.62
LDB2O43679 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.92□□□□□ -1.62
LDB2O43679 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
LDB2O43679 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
LDB2O43679 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.92□□□□□ -1.62
LDB2O43679 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LDB2O43679 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LDB2O43679 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LDB2O43679 AC103591.2-201ENST00000265259 766 ntBASIC4.92□□□□□ -1.62
LDB2O43679 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
LDB2O43679 RNU6-249P-201ENST00000363016 102 ntBASIC4.92□□□□□ -1.62
LDB2O43679 RNU5B-1-201ENST00000363286 116 ntBASIC4.92□□□□□ -1.62
LDB2O43679 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
LDB2O43679 RNA5SP345-201ENST00000410646 108 ntBASIC4.92□□□□□ -1.62
LDB2O43679 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.92□□□□□ -1.62
LDB2O43679 AC092648.1-201ENST00000425870 423 ntBASIC4.92□□□□□ -1.62
LDB2O43679 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.92□□□□□ -1.62
LDB2O43679 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LDB2O43679 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.92□□□□□ -1.62
LDB2O43679 OR10R1P-201ENST00000441524 1141 ntBASIC4.92□□□□□ -1.62
LDB2O43679 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.92□□□□□ -1.62
LDB2O43679 AC012512.1-201ENST00000446594 718 ntBASIC4.92□□□□□ -1.62
LDB2O43679 AC092155.2-201ENST00000454675 477 ntBASIC4.92□□□□□ -1.62
LDB2O43679 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.92□□□□□ -1.62
LDB2O43679 GYG1P1-201ENST00000460864 698 ntBASIC4.92□□□□□ -1.62
LDB2O43679 AC140172.1-201ENST00000502928 141 ntBASIC4.92□□□□□ -1.62
LDB2O43679 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.92□□□□□ -1.62
LDB2O43679 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.92□□□□□ -1.62
LDB2O43679 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.92□□□□□ -1.62
LDB2O43679 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LDB2O43679 AC002456.2-201ENST00000509356 380 ntBASIC4.92□□□□□ -1.62
LDB2O43679 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.92□□□□□ -1.62
LDB2O43679 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LDB2O43679 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4.92□□□□□ -1.62
LDB2O43679 SNORA31.13-201ENST00000516624 135 ntBASIC4.92□□□□□ -1.62
LDB2O43679 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.92□□□□□ -1.62
LDB2O43679 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LDB2O43679 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.92□□□□□ -1.62
LDB2O43679 AP000859.1-201ENST00000525536 307 ntBASIC4.92□□□□□ -1.62
LDB2O43679 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LDB2O43679 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.92□□□□□ -1.62
LDB2O43679 AL358913.1-201ENST00000554342 121 ntBASIC4.92□□□□□ -1.62
LDB2O43679 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.92□□□□□ -1.62
LDB2O43679 NIFKP6-201ENST00000598115 845 ntBASIC4.92□□□□□ -1.62
LDB2O43679 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.92□□□□□ -1.62
LDB2O43679 AC100827.5-201ENST00000615883 426 ntBASIC4.92□□□□□ -1.62
LDB2O43679 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.92□□□□□ -1.62
LDB2O43679 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.92□□□□□ -1.62
LDB2O43679 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.92□□□□□ -1.62
LDB2O43679 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LDB2O43679 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LDB2O43679 AC008758.3-201ENST00000507003 1829 ntBASIC4.92□□□□□ -1.62
LDB2O43679 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.92□□□□□ -1.62
LDB2O43679 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LDB2O43679 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LDB2O43679 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LDB2O43679 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
LDB2O43679 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LDB2O43679 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LDB2O43679 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.91□□□□□ -1.62
LDB2O43679 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LDB2O43679 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LDB2O43679 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.91□□□□□ -1.62
LDB2O43679 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LDB2O43679 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LDB2O43679 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
LDB2O43679 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 180.2 ms