Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 OR2AF1P-201ENST00000454899 889 ntBASIC5.53□□□□□ -1.52
FOXN3O00409 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.53□□□□□ -1.52
FOXN3O00409 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.53□□□□□ -1.52
FOXN3O00409 BX510359.5-201ENST00000515651 304 ntBASIC5.53□□□□□ -1.52
FOXN3O00409 RNU6-347P-201ENST00000516658 105 ntBASIC5.53□□□□□ -1.52
FOXN3O00409 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.53□□□□□ -1.52
FOXN3O00409 IGKV2-18-201ENST00000522607 343 ntBASIC5.53□□□□□ -1.52
FOXN3O00409 AC010306.1-201ENST00000523223 1117 ntBASIC5.53□□□□□ -1.52
FOXN3O00409 SETP1-201ENST00000556014 845 ntBASIC5.53□□□□□ -1.52
FOXN3O00409 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.53□□□□□ -1.52
FOXN3O00409 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC5.53□□□□□ -1.52
FOXN3O00409 AC009852.2-201ENST00000567898 485 ntBASIC5.53□□□□□ -1.52
FOXN3O00409 AL451064.1-201ENST00000607718 471 ntBASIC5.53□□□□□ -1.52
FOXN3O00409 AP005432.2-201ENST00000608162 586 ntBASIC5.53□□□□□ -1.52
FOXN3O00409 AC097478.2-201ENST00000610572 514 ntBASIC5.53□□□□□ -1.52
FOXN3O00409 AC009464.1-201ENST00000615731 469 ntBASIC5.53□□□□□ -1.52
FOXN3O00409 AC090527.3-201ENST00000619041 548 ntBASIC5.53□□□□□ -1.52
FOXN3O00409 AP000484.1-201ENST00000620067 1252 ntBASIC5.53□□□□□ -1.52
FOXN3O00409 MIR6837-201ENST00000620884 64 ntBASIC5.53□□□□□ -1.52
FOXN3O00409 AC138965.3-201ENST00000623875 498 ntBASIC5.53□□□□□ -1.52
FOXN3O00409 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.53□□□□□ -1.52
FOXN3O00409 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.53□□□□□ -1.52
FOXN3O00409 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.53□□□□□ -1.52
FOXN3O00409 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5.53□□□□□ -1.52
FOXN3O00409 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.53□□□□□ -1.52
FOXN3O00409 CU459211.1-201ENST00000635667 749 ntBASIC5.53□□□□□ -1.52
FOXN3O00409 CASC19-264ENST00000641912 1184 ntBASIC5.53□□□□□ -1.52
FOXN3O00409 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
FOXN3O00409 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.53□□□□□ -1.52
FOXN3O00409 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.53□□□□□ -1.52
FOXN3O00409 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
FOXN3O00409 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.53□□□□□ -1.52
FOXN3O00409 NSRP1P1-201ENST00000444067 1693 ntBASIC5.53□□□□□ -1.52
FOXN3O00409 CR788268.1-201ENST00000603931 1809 ntBASIC5.53□□□□□ -1.52
FOXN3O00409 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
FOXN3O00409 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
FOXN3O00409 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.53□□□□□ -1.52
FOXN3O00409 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.52□□□□□ -1.53
FOXN3O00409 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
FOXN3O00409 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
FOXN3O00409 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
FOXN3O00409 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.52□□□□□ -1.53
FOXN3O00409 MIR600-201ENST00000385007 98 ntBASIC5.52□□□□□ -1.53
FOXN3O00409 MIR513B-201ENST00000385136 84 ntBASIC5.52□□□□□ -1.53
FOXN3O00409 NPM1P4-201ENST00000414095 812 ntBASIC5.52□□□□□ -1.53
FOXN3O00409 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.52□□□□□ -1.53
FOXN3O00409 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.52□□□□□ -1.53
FOXN3O00409 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.52□□□□□ -1.53
FOXN3O00409 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.52□□□□□ -1.53
FOXN3O00409 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.52□□□□□ -1.53
FOXN3O00409 CR769776.1-201ENST00000441254 787 ntBASIC5.52□□□□□ -1.53
FOXN3O00409 RPS7P5-201ENST00000441482 581 ntBASIC5.52□□□□□ -1.53
FOXN3O00409 YWHAQP9-201ENST00000445891 512 ntBASIC5.52□□□□□ -1.53
FOXN3O00409 RPS4XP12-201ENST00000461747 709 ntBASIC5.52□□□□□ -1.53
FOXN3O00409 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.52□□□□□ -1.53
FOXN3O00409 AC005912.1-201ENST00000495392 255 ntBASIC5.52□□□□□ -1.53
FOXN3O00409 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.52□□□□□ -1.53
FOXN3O00409 AC024558.1-201ENST00000505008 528 ntBASIC5.52□□□□□ -1.53
FOXN3O00409 GTF2F2P1-201ENST00000511083 675 ntBASIC5.52□□□□□ -1.53
FOXN3O00409 AC112673.1-201ENST00000513168 575 ntBASIC5.52□□□□□ -1.53
FOXN3O00409 IGJP1-201ENST00000522682 475 ntBASIC5.52□□□□□ -1.53
FOXN3O00409 AC124293.1-201ENST00000530034 493 ntBASIC5.52□□□□□ -1.53
FOXN3O00409 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC5.52□□□□□ -1.53
FOXN3O00409 AC139103.1-201ENST00000534696 1030 ntBASIC5.52□□□□□ -1.53
FOXN3O00409 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.52□□□□□ -1.53
FOXN3O00409 AC044913.1-201ENST00000557200 430 ntBASIC5.52□□□□□ -1.53
FOXN3O00409 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.52□□□□□ -1.53
FOXN3O00409 AC023813.2-201ENST00000564321 469 ntBASIC5.52□□□□□ -1.53
FOXN3O00409 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
FOXN3O00409 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.52□□□□□ -1.53
FOXN3O00409 MIR5708-201ENST00000579723 85 ntBASIC5.52□□□□□ -1.53
FOXN3O00409 AP005262.1-201ENST00000582646 997 ntBASIC5.52□□□□□ -1.53
FOXN3O00409 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.52□□□□□ -1.53
FOXN3O00409 AC002487.1-201ENST00000604565 994 ntBASIC5.52□□□□□ -1.53
FOXN3O00409 AP000238.1-201ENST00000608759 426 ntBASIC5.52□□□□□ -1.53
FOXN3O00409 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
FOXN3O00409 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
FOXN3O00409 AL353726.1-201ENST00000614041 1000 ntBASIC5.52□□□□□ -1.53
FOXN3O00409 VN1R7P-201ENST00000619242 903 ntBASIC5.52□□□□□ -1.53
FOXN3O00409 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.52□□□□□ -1.53
FOXN3O00409 AC011330.2-201ENST00000621680 635 ntBASIC5.52□□□□□ -1.53
FOXN3O00409 AC116563.2-201ENST00000624751 535 ntBASIC5.52□□□□□ -1.53
FOXN3O00409 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.52□□□□□ -1.53
FOXN3O00409 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.52□□□□□ -1.53
FOXN3O00409 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
FOXN3O00409 SMG1P6-201ENST00000532337 2930 ntBASIC5.52□□□□□ -1.53
FOXN3O00409 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
FOXN3O00409 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
FOXN3O00409 AC063976.2-201ENST00000425667 3556 ntBASIC5.52□□□□□ -1.53
FOXN3O00409 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
FOXN3O00409 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
FOXN3O00409 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
FOXN3O00409 AC112198.2-201ENST00000426589 6996 ntBASIC5.51□□□□□ -1.53
FOXN3O00409 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
FOXN3O00409 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
FOXN3O00409 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
FOXN3O00409 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.51□□□□□ -1.53
FOXN3O00409 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
FOXN3O00409 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.51□□□□□ -1.53
FOXN3O00409 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms