Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.11□□□□□ -1.75
UPK1AO00322 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.11□□□□□ -1.75
UPK1AO00322 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.11□□□□□ -1.75
UPK1AO00322 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.11□□□□□ -1.75
UPK1AO00322 AC025554.1-201ENST00000505641 188 ntBASIC4.11□□□□□ -1.75
UPK1AO00322 AC111000.3-201ENST00000508057 576 ntBASIC4.11□□□□□ -1.75
UPK1AO00322 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
UPK1AO00322 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.11□□□□□ -1.75
UPK1AO00322 RN7SKP92-201ENST00000517266 244 ntBASIC4.11□□□□□ -1.75
UPK1AO00322 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.11□□□□□ -1.75
UPK1AO00322 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.11□□□□□ -1.75
UPK1AO00322 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.11□□□□□ -1.75
UPK1AO00322 AC025423.2-201ENST00000537570 439 ntBASIC4.11□□□□□ -1.75
UPK1AO00322 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.11□□□□□ -1.75
UPK1AO00322 AC137768.1-201ENST00000549998 553 ntBASIC4.11□□□□□ -1.75
UPK1AO00322 AC007448.1-201ENST00000582714 234 ntBASIC4.11□□□□□ -1.75
UPK1AO00322 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.11□□□□□ -1.75
UPK1AO00322 AC079587.1-201ENST00000603846 277 ntBASIC4.11□□□□□ -1.75
UPK1AO00322 AC133552.5-201ENST00000604266 540 ntBASIC4.11□□□□□ -1.75
UPK1AO00322 AC067838.1-201ENST00000606064 577 ntBASIC4.11□□□□□ -1.75
UPK1AO00322 AC012603.1-201ENST00000606424 528 ntBASIC4.11□□□□□ -1.75
UPK1AO00322 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
UPK1AO00322 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.11□□□□□ -1.75
UPK1AO00322 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
UPK1AO00322 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.11□□□□□ -1.75
UPK1AO00322 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.11□□□□□ -1.75
UPK1AO00322 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
UPK1AO00322 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
UPK1AO00322 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
UPK1AO00322 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
UPK1AO00322 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
UPK1AO00322 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
UPK1AO00322 AC087190.4-201ENST00000574616 8334 ntBASIC4.1□□□□□ -1.75
UPK1AO00322 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
UPK1AO00322 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
UPK1AO00322 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
UPK1AO00322 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.1□□□□□ -1.75
UPK1AO00322 AC008033.1-201ENST00000216407 1162 ntBASIC4.1□□□□□ -1.75
UPK1AO00322 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
UPK1AO00322 RNA5SP388-201ENST00000362584 119 ntBASIC4.1□□□□□ -1.75
UPK1AO00322 RNU6-398P-201ENST00000384143 109 ntBASIC4.1□□□□□ -1.75
UPK1AO00322 RNA5SP332-201ENST00000391063 115 ntBASIC4.1□□□□□ -1.75
UPK1AO00322 AC098592.2-201ENST00000413158 265 ntBASIC4.1□□□□□ -1.75
UPK1AO00322 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.1□□□□□ -1.75
UPK1AO00322 AL138878.2-201ENST00000440581 1241 ntBASIC4.1□□□□□ -1.75
UPK1AO00322 HMGB3P22-202ENST00000451823 572 ntBASIC4.1□□□□□ -1.75
UPK1AO00322 OR52Y1P-201ENST00000452418 828 ntBASIC4.1□□□□□ -1.75
UPK1AO00322 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.1□□□□□ -1.75
UPK1AO00322 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.1□□□□□ -1.75
UPK1AO00322 ATP1B1P1-201ENST00000509767 915 ntBASIC4.1□□□□□ -1.75
UPK1AO00322 UBTFL9-201ENST00000534504 1148 ntBASIC4.1□□□□□ -1.75
UPK1AO00322 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
UPK1AO00322 RPL12P25-202ENST00000598100 674 ntBASIC4.1□□□□□ -1.75
UPK1AO00322 AC093765.1-201ENST00000603758 881 ntBASIC4.1□□□□□ -1.75
UPK1AO00322 AC116651.1-201ENST00000609724 556 ntBASIC4.1□□□□□ -1.75
UPK1AO00322 AC138907.10-201ENST00000623708 983 ntBASIC4.1□□□□□ -1.75
UPK1AO00322 AC008785.1-201ENST00000624475 456 ntBASIC4.1□□□□□ -1.75
UPK1AO00322 RFC1-217ENST00000639695 867 ntTSL 5 BASIC4.1□□□□□ -1.75
UPK1AO00322 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
UPK1AO00322 ZNF962P-201ENST00000443465 3140 ntBASIC4.1□□□□□ -1.75
UPK1AO00322 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.09□□□□□ -1.75
UPK1AO00322 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.09□□□□□ -1.75
UPK1AO00322 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.09□□□□□ -1.75
UPK1AO00322 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
UPK1AO00322 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
UPK1AO00322 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
UPK1AO00322 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
UPK1AO00322 MIR192-201ENST00000384915 110 ntBASIC4.09□□□□□ -1.75
UPK1AO00322 SNORA68.2-201ENST00000391263 128 ntBASIC4.09□□□□□ -1.75
UPK1AO00322 RPL23AP59-201ENST00000399415 461 ntBASIC4.09□□□□□ -1.75
UPK1AO00322 VN1R31P-201ENST00000417498 730 ntBASIC4.09□□□□□ -1.75
UPK1AO00322 AL356387.2-201ENST00000422272 243 ntBASIC4.09□□□□□ -1.75
UPK1AO00322 MTND2P11-201ENST00000423638 648 ntBASIC4.09□□□□□ -1.75
UPK1AO00322 TRGV7-201ENST00000427089 353 ntBASIC4.09□□□□□ -1.75
UPK1AO00322 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.09□□□□□ -1.75
UPK1AO00322 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.09□□□□□ -1.75
UPK1AO00322 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.09□□□□□ -1.75
UPK1AO00322 RN7SL812P-201ENST00000493791 279 ntBASIC4.09□□□□□ -1.75
UPK1AO00322 AK3P4-201ENST00000504283 583 ntBASIC4.09□□□□□ -1.75
UPK1AO00322 AC093720.1-201ENST00000505681 714 ntBASIC4.09□□□□□ -1.75
UPK1AO00322 RN7SKP34-201ENST00000516142 244 ntBASIC4.09□□□□□ -1.75
UPK1AO00322 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.09□□□□□ -1.75
UPK1AO00322 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.09□□□□□ -1.75
UPK1AO00322 AP001804.2-201ENST00000533932 910 ntBASIC4.09□□□□□ -1.75
UPK1AO00322 OR5AN2P-201ENST00000534535 896 ntBASIC4.09□□□□□ -1.75
UPK1AO00322 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.09□□□□□ -1.75
UPK1AO00322 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.09□□□□□ -1.75
UPK1AO00322 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
UPK1AO00322 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.09□□□□□ -1.75
UPK1AO00322 MIR4443-201ENST00000585052 53 ntBASIC4.09□□□□□ -1.75
UPK1AO00322 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.09□□□□□ -1.75
UPK1AO00322 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.09□□□□□ -1.75
UPK1AO00322 AC020915.5-201ENST00000596836 964 ntBASIC4.09□□□□□ -1.75
UPK1AO00322 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.09□□□□□ -1.75
UPK1AO00322 AC002044.3-201ENST00000623314 541 ntBASIC4.09□□□□□ -1.75
UPK1AO00322 AP003400.2-201ENST00000624036 666 ntBASIC4.09□□□□□ -1.75
UPK1AO00322 AC067931.1-201ENST00000624190 671 ntBASIC4.09□□□□□ -1.75
UPK1AO00322 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.09□□□□□ -1.75
UPK1AO00322 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
UPK1AO00322 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.09□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms