Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM49D1C9J1S8 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.3□□□□□ -1.72
TRIM49D1C9J1S8 AC008033.1-201ENST00000216407 1162 ntBASIC4.3□□□□□ -1.72
TRIM49D1C9J1S8 AC010132.2-201ENST00000295493 1043 ntBASIC4.3□□□□□ -1.72
TRIM49D1C9J1S8 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
TRIM49D1C9J1S8 MTATP6P19-201ENST00000413797 659 ntBASIC4.3□□□□□ -1.72
TRIM49D1C9J1S8 RPS26P13-201ENST00000419030 330 ntBASIC4.3□□□□□ -1.72
TRIM49D1C9J1S8 AC013268.2-201ENST00000420753 337 ntBASIC4.3□□□□□ -1.72
TRIM49D1C9J1S8 RPL7AP25-201ENST00000423357 805 ntBASIC4.3□□□□□ -1.72
TRIM49D1C9J1S8 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.3□□□□□ -1.72
TRIM49D1C9J1S8 AC104837.2-201ENST00000427236 424 ntBASIC4.3□□□□□ -1.72
TRIM49D1C9J1S8 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.3□□□□□ -1.72
TRIM49D1C9J1S8 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.3□□□□□ -1.72
TRIM49D1C9J1S8 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.3□□□□□ -1.72
TRIM49D1C9J1S8 HIGD1AP8-201ENST00000453927 274 ntBASIC4.3□□□□□ -1.72
TRIM49D1C9J1S8 AC006517.1-201ENST00000480485 328 ntBASIC4.3□□□□□ -1.72
TRIM49D1C9J1S8 AP000926.3-201ENST00000497201 299 ntBASIC4.3□□□□□ -1.72
TRIM49D1C9J1S8 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.3□□□□□ -1.72
TRIM49D1C9J1S8 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.3□□□□□ -1.72
TRIM49D1C9J1S8 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.3□□□□□ -1.72
TRIM49D1C9J1S8 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.3□□□□□ -1.72
TRIM49D1C9J1S8 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.3□□□□□ -1.72
TRIM49D1C9J1S8 AP000827.1-201ENST00000527814 258 ntBASIC4.3□□□□□ -1.72
TRIM49D1C9J1S8 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.3□□□□□ -1.72
TRIM49D1C9J1S8 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.3□□□□□ -1.72
TRIM49D1C9J1S8 AC018552.1-201ENST00000562099 811 ntBASIC4.3□□□□□ -1.72
TRIM49D1C9J1S8 MIR4436B2-201ENST00000581415 91 ntBASIC4.3□□□□□ -1.72
TRIM49D1C9J1S8 MIR4436B1-201ENST00000583272 91 ntBASIC4.3□□□□□ -1.72
TRIM49D1C9J1S8 OR1AB1P-201ENST00000585564 761 ntBASIC4.3□□□□□ -1.72
TRIM49D1C9J1S8 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.3□□□□□ -1.72
TRIM49D1C9J1S8 AC119501.1-201ENST00000603646 475 ntBASIC4.3□□□□□ -1.72
TRIM49D1C9J1S8 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.3□□□□□ -1.72
TRIM49D1C9J1S8 AC064801.1-201ENST00000612025 407 ntBASIC4.3□□□□□ -1.72
TRIM49D1C9J1S8 AL021997.2-201ENST00000615674 271 ntBASIC4.3□□□□□ -1.72
TRIM49D1C9J1S8 AP001005.3-201ENST00000622049 129 ntBASIC4.3□□□□□ -1.72
TRIM49D1C9J1S8 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.3□□□□□ -1.72
TRIM49D1C9J1S8 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
TRIM49D1C9J1S8 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM49D1C9J1S8 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
TRIM49D1C9J1S8 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM49D1C9J1S8 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM49D1C9J1S8 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM49D1C9J1S8 MFSD8-242ENST00000641690 4199 ntBASIC4.29□□□□□ -1.72
TRIM49D1C9J1S8 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM49D1C9J1S8 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
TRIM49D1C9J1S8 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM49D1C9J1S8 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.29□□□□□ -1.72
TRIM49D1C9J1S8 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
TRIM49D1C9J1S8 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
TRIM49D1C9J1S8 RNU6-729P-201ENST00000384399 107 ntBASIC4.29□□□□□ -1.72
TRIM49D1C9J1S8 AC240504.1-201ENST00000395709 845 ntBASIC4.29□□□□□ -1.72
TRIM49D1C9J1S8 AL607077.1-201ENST00000401718 499 ntBASIC4.29□□□□□ -1.72
TRIM49D1C9J1S8 RNA5SP306-201ENST00000411087 107 ntBASIC4.29□□□□□ -1.72
TRIM49D1C9J1S8 RNA5SP39-201ENST00000411245 120 ntBASIC4.29□□□□□ -1.72
TRIM49D1C9J1S8 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.29□□□□□ -1.72
TRIM49D1C9J1S8 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.29□□□□□ -1.72
TRIM49D1C9J1S8 AL450263.2-201ENST00000439400 589 ntBASIC4.29□□□□□ -1.72
TRIM49D1C9J1S8 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.29□□□□□ -1.72
TRIM49D1C9J1S8 PTMAP3-201ENST00000447474 330 ntBASIC4.29□□□□□ -1.72
TRIM49D1C9J1S8 DHFRP3-201ENST00000455595 559 ntBASIC4.29□□□□□ -1.72
TRIM49D1C9J1S8 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM49D1C9J1S8 RPL35AP28-201ENST00000459730 331 ntBASIC4.29□□□□□ -1.72
TRIM49D1C9J1S8 AC098583.1-201ENST00000480875 255 ntBASIC4.29□□□□□ -1.72
TRIM49D1C9J1S8 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
TRIM49D1C9J1S8 AC139783.2-201ENST00000504847 1145 ntBASIC4.29□□□□□ -1.72
TRIM49D1C9J1S8 AC113430.1-201ENST00000506872 718 ntBASIC4.29□□□□□ -1.72
TRIM49D1C9J1S8 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM49D1C9J1S8 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.29□□□□□ -1.72
TRIM49D1C9J1S8 AC006064.5-201ENST00000541782 248 ntBASIC4.29□□□□□ -1.72
TRIM49D1C9J1S8 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM49D1C9J1S8 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.29□□□□□ -1.72
TRIM49D1C9J1S8 AL109766.1-201ENST00000555080 552 ntBASIC4.29□□□□□ -1.72
TRIM49D1C9J1S8 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM49D1C9J1S8 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM49D1C9J1S8 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM49D1C9J1S8 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.29□□□□□ -1.72
TRIM49D1C9J1S8 AL354984.3-201ENST00000604803 325 ntBASIC4.29□□□□□ -1.72
TRIM49D1C9J1S8 AC138473.1-201ENST00000605717 526 ntBASIC4.29□□□□□ -1.72
TRIM49D1C9J1S8 AC015922.4-201ENST00000612568 690 ntBASIC4.29□□□□□ -1.72
TRIM49D1C9J1S8 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.29□□□□□ -1.72
TRIM49D1C9J1S8 AL049536.1-201ENST00000625043 744 ntBASIC4.29□□□□□ -1.72
TRIM49D1C9J1S8 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
TRIM49D1C9J1S8 AC053481.2-202ENST00000582394 1500 ntBASIC4.29□□□□□ -1.72
TRIM49D1C9J1S8 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
TRIM49D1C9J1S8 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM49D1C9J1S8 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM49D1C9J1S8 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
TRIM49D1C9J1S8 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM49D1C9J1S8 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
TRIM49D1C9J1S8 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.28□□□□□ -1.72
TRIM49D1C9J1S8 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM49D1C9J1S8 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.28□□□□□ -1.72
TRIM49D1C9J1S8 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM49D1C9J1S8 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM49D1C9J1S8 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.28□□□□□ -1.72
TRIM49D1C9J1S8 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM49D1C9J1S8 SNORD113.2-201ENST00000364166 89 ntBASIC4.28□□□□□ -1.72
TRIM49D1C9J1S8 RNA5SP175-201ENST00000364275 119 ntBASIC4.28□□□□□ -1.72
TRIM49D1C9J1S8 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
TRIM49D1C9J1S8 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms