Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 AC092642.1-201ENST00000392417 425 ntBASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 MIR1275-201ENST00000408770 80 ntBASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 RNU2-62P-201ENST00000410868 191 ntBASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 NPM1P40-201ENST00000412758 733 ntBASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 CHEK2P3-201ENST00000416118 248 ntBASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 AL645937.1-202ENST00000421799 937 ntBASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 AC007365.2-201ENST00000428806 458 ntBASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 AC079807.1-201ENST00000429993 481 ntBASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 AL389925.1-201ENST00000432257 728 ntBASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 AL445466.1-201ENST00000448432 357 ntBASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 AC144530.1-201ENST00000452862 555 ntBASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 PPP1R2P5-201ENST00000457256 603 ntBASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 HMGN2P26-201ENST00000463169 339 ntBASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 RPL32P9-201ENST00000487963 407 ntBASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 SUB1P1-201ENST00000524415 382 ntBASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 PSMA2P1-201ENST00000526365 646 ntBASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 CASP1-212ENST00000531166 300 ntTSL 5 BASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 MIR3154-201ENST00000577829 84 ntBASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 AC008737.2-201ENST00000599446 118 ntBASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 AC021646.1-201ENST00000605469 484 ntBASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 AC068213.1-201ENST00000625124 226 ntBASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 TRIM51HP-202ENST00000530412 1823 ntBASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 CDC27P2-201ENST00000425026 1922 ntBASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 AF287957.1-201ENST00000607368 1595 ntBASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 OR2M1P-201ENST00000318104 951 ntBASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 RNU6-921P-201ENST00000384361 107 ntBASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 AL591416.1-201ENST00000404015 867 ntBASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 AL078604.1-201ENST00000404609 466 ntBASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 AC073136.2-201ENST00000417282 849 ntBASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 DUTP6-201ENST00000425573 462 ntBASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 LYPLA1P1-201ENST00000434514 622 ntBASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 RPS15AP9-201ENST00000439856 381 ntBASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 AL390728.3-201ENST00000452704 270 ntBASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 RN7SL390P-201ENST00000470634 284 ntBASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 RN7SL751P-201ENST00000473281 284 ntBASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 AC008967.1-201ENST00000504843 163 ntBASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 AC005363.1-201ENST00000530779 351 ntBASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 MT1CP-201ENST00000567054 174 ntBASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 AL356432.3-201ENST00000568952 465 ntBASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 RBM4-213ENST00000578778 582 ntTSL 4 BASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 AC115085.1-201ENST00000588924 229 ntBASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 DPPA3P3-201ENST00000603842 430 ntBASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 AC012368.3-201ENST00000604190 219 ntBASIC7.35□□□□□ -1.23
LIMD1Q9UGP4 AP005329.3-201ENST00000609924 686 ntBASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms