Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AP005435.3-201ENST00000531260 3198 ntBASIC4.29□□□□□ -1.72
CHD7Q9P2D1 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CHD7Q9P2D1 AC005300.1-201ENST00000428401 373 ntBASIC4.29□□□□□ -1.72
CHD7Q9P2D1 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.29□□□□□ -1.72
CHD7Q9P2D1 RPL36AP13-201ENST00000457490 317 ntBASIC4.29□□□□□ -1.72
CHD7Q9P2D1 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.29□□□□□ -1.72
CHD7Q9P2D1 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.29□□□□□ -1.72
CHD7Q9P2D1 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC4.29□□□□□ -1.72
CHD7Q9P2D1 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.29□□□□□ -1.72
CHD7Q9P2D1 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.29□□□□□ -1.72
CHD7Q9P2D1 U3.45-201ENST00000607547 219 ntBASIC4.29□□□□□ -1.72
CHD7Q9P2D1 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC4.29□□□□□ -1.72
CHD7Q9P2D1 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CHD7Q9P2D1 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CHD7Q9P2D1 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.29□□□□□ -1.72
CHD7Q9P2D1 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CHD7Q9P2D1 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CHD7Q9P2D1 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.29□□□□□ -1.72
CHD7Q9P2D1 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CHD7Q9P2D1 SNORA48.2-201ENST00000390926 124 ntBASIC4.29□□□□□ -1.72
CHD7Q9P2D1 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CHD7Q9P2D1 PDSS1P2-201ENST00000449397 678 ntBASIC4.29□□□□□ -1.72
CHD7Q9P2D1 DDX39BP2-208ENST00000453923 258 ntBASIC4.29□□□□□ -1.72
CHD7Q9P2D1 RPL23AP37-201ENST00000479658 549 ntBASIC4.29□□□□□ -1.72
CHD7Q9P2D1 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.29□□□□□ -1.72
CHD7Q9P2D1 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.29□□□□□ -1.72
CHD7Q9P2D1 MIR5187-201ENST00000583479 76 ntBASIC4.29□□□□□ -1.72
CHD7Q9P2D1 YPEL5P2-201ENST00000605553 359 ntBASIC4.29□□□□□ -1.72
CHD7Q9P2D1 AL353726.1-201ENST00000614041 1000 ntBASIC4.29□□□□□ -1.72
CHD7Q9P2D1 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.28□□□□□ -1.72
CHD7Q9P2D1 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CHD7Q9P2D1 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CHD7Q9P2D1 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CHD7Q9P2D1 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CHD7Q9P2D1 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CHD7Q9P2D1 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.28□□□□□ -1.72
CHD7Q9P2D1 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.28□□□□□ -1.72
CHD7Q9P2D1 RPL6P9-201ENST00000466502 859 ntBASIC4.28□□□□□ -1.72
CHD7Q9P2D1 BNIP3P41-201ENST00000503774 571 ntBASIC4.28□□□□□ -1.72
CHD7Q9P2D1 AC005520.3-201ENST00000602874 370 ntBASIC4.28□□□□□ -1.72
CHD7Q9P2D1 AC005972.3-201ENST00000606304 481 ntBASIC4.28□□□□□ -1.72
CHD7Q9P2D1 RNU1-30P-201ENST00000606575 163 ntBASIC4.28□□□□□ -1.72
CHD7Q9P2D1 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
CHD7Q9P2D1 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CHD7Q9P2D1 AL137141.1-201ENST00000624622 4836 ntBASIC4.28□□□□□ -1.72
CHD7Q9P2D1 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CHD7Q9P2D1 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CHD7Q9P2D1 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CHD7Q9P2D1 AC079809.1-201ENST00000415468 276 ntBASIC4.28□□□□□ -1.72
CHD7Q9P2D1 AL049873.1-201ENST00000480540 376 ntBASIC4.28□□□□□ -1.72
CHD7Q9P2D1 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CHD7Q9P2D1 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CHD7Q9P2D1 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.27□□□□□ -1.73
CHD7Q9P2D1 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CHD7Q9P2D1 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CHD7Q9P2D1 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CHD7Q9P2D1 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CHD7Q9P2D1 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CHD7Q9P2D1 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CHD7Q9P2D1 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.27□□□□□ -1.73
CHD7Q9P2D1 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
CHD7Q9P2D1 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CHD7Q9P2D1 SNORD3H-201ENST00000384486 214 ntBASIC4.27□□□□□ -1.73
CHD7Q9P2D1 AL157385.1-201ENST00000446973 268 ntBASIC4.27□□□□□ -1.73
CHD7Q9P2D1 BX510359.1-201ENST00000456973 237 ntBASIC4.27□□□□□ -1.73
CHD7Q9P2D1 OR5B10P-201ENST00000532869 642 ntBASIC4.27□□□□□ -1.73
CHD7Q9P2D1 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.27□□□□□ -1.73
CHD7Q9P2D1 AC115621.1-201ENST00000604653 858 ntBASIC4.27□□□□□ -1.73
CHD7Q9P2D1 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.27□□□□□ -1.73
CHD7Q9P2D1 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.27□□□□□ -1.73
CHD7Q9P2D1 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CHD7Q9P2D1 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CHD7Q9P2D1 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CHD7Q9P2D1 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.27□□□□□ -1.73
CHD7Q9P2D1 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC4.27□□□□□ -1.73
CHD7Q9P2D1 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CHD7Q9P2D1 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
CHD7Q9P2D1 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC4.27□□□□□ -1.73
CHD7Q9P2D1 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CHD7Q9P2D1 CBX1P3-201ENST00000413296 527 ntBASIC4.27□□□□□ -1.73
CHD7Q9P2D1 RPS7P15-201ENST00000415804 584 ntBASIC4.27□□□□□ -1.73
CHD7Q9P2D1 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.27□□□□□ -1.73
CHD7Q9P2D1 EIF1P3-201ENST00000423841 334 ntBASIC4.27□□□□□ -1.73
CHD7Q9P2D1 CYCSP53-201ENST00000455540 265 ntBASIC4.27□□□□□ -1.73
CHD7Q9P2D1 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.27□□□□□ -1.73
CHD7Q9P2D1 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC4.27□□□□□ -1.73
CHD7Q9P2D1 AC091516.1-201ENST00000549191 703 ntBASIC4.27□□□□□ -1.73
CHD7Q9P2D1 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.27□□□□□ -1.73
CHD7Q9P2D1 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.27□□□□□ -1.73
CHD7Q9P2D1 AL645927.2-201ENST00000618350 349 ntBASIC4.27□□□□□ -1.73
CHD7Q9P2D1 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CHD7Q9P2D1 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CHD7Q9P2D1 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CHD7Q9P2D1 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CHD7Q9P2D1 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CHD7Q9P2D1 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC4.27□□□□□ -1.73
CHD7Q9P2D1 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CHD7Q9P2D1 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CHD7Q9P2D1 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CHD7Q9P2D1 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms