Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC88CQ9P219 AC023762.1-201ENST00000603280 584 ntBASIC4.16□□□□□ -1.74
CCDC88CQ9P219 AL031666.3-201ENST00000609320 1006 ntBASIC4.16□□□□□ -1.74
CCDC88CQ9P219 AC015922.4-201ENST00000612568 690 ntBASIC4.16□□□□□ -1.74
CCDC88CQ9P219 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC88CQ9P219 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC88CQ9P219 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.15□□□□□ -1.74
CCDC88CQ9P219 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
CCDC88CQ9P219 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
CCDC88CQ9P219 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.15□□□□□ -1.74
CCDC88CQ9P219 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CCDC88CQ9P219 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC88CQ9P219 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.15□□□□□ -1.75
CCDC88CQ9P219 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC88CQ9P219 AL121657.1-201ENST00000327215 531 ntBASIC4.15□□□□□ -1.75
CCDC88CQ9P219 IL6STP1-201ENST00000346911 1020 ntBASIC4.15□□□□□ -1.75
CCDC88CQ9P219 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC88CQ9P219 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC88CQ9P219 AL359073.1-201ENST00000448036 403 ntBASIC4.15□□□□□ -1.75
CCDC88CQ9P219 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC88CQ9P219 PSMC1P13-201ENST00000458195 985 ntBASIC4.15□□□□□ -1.75
CCDC88CQ9P219 ATP5G1P3-201ENST00000463301 410 ntBASIC4.15□□□□□ -1.75
CCDC88CQ9P219 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC88CQ9P219 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC88CQ9P219 IFITM8P-201ENST00000522529 394 ntBASIC4.15□□□□□ -1.75
CCDC88CQ9P219 TOMM20P2-201ENST00000540082 421 ntBASIC4.15□□□□□ -1.75
CCDC88CQ9P219 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC88CQ9P219 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC88CQ9P219 AC008759.1-201ENST00000589783 983 ntBASIC4.15□□□□□ -1.75
CCDC88CQ9P219 AC073137.1-201ENST00000605636 634 ntBASIC4.15□□□□□ -1.75
CCDC88CQ9P219 AC091979.2-201ENST00000607514 214 ntBASIC4.15□□□□□ -1.75
CCDC88CQ9P219 MIR6891-201ENST00000618788 93 ntBASIC4.15□□□□□ -1.75
CCDC88CQ9P219 AL035461.2-201ENST00000619201 524 ntBASIC4.15□□□□□ -1.75
CCDC88CQ9P219 AC007546.2-201ENST00000623996 360 ntBASIC4.15□□□□□ -1.75
CCDC88CQ9P219 AC140479.6-201ENST00000633535 357 ntBASIC4.15□□□□□ -1.75
CCDC88CQ9P219 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
CCDC88CQ9P219 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CCDC88CQ9P219 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.15□□□□□ -1.75
CCDC88CQ9P219 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC88CQ9P219 TTC39DP-201ENST00000416781 1688 ntBASIC4.15□□□□□ -1.75
CCDC88CQ9P219 MAPK10-263ENST00000641052 4307 ntBASIC4.14□□□□□ -1.75
CCDC88CQ9P219 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CCDC88CQ9P219 Y_RNA.126-201ENST00000363382 111 ntBASIC4.14□□□□□ -1.75
CCDC88CQ9P219 RNA5SP317-201ENST00000410176 116 ntBASIC4.14□□□□□ -1.75
CCDC88CQ9P219 RNA5SP311-201ENST00000411290 116 ntBASIC4.14□□□□□ -1.75
CCDC88CQ9P219 RPL6P29-201ENST00000414863 865 ntBASIC4.14□□□□□ -1.75
CCDC88CQ9P219 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC88CQ9P219 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC88CQ9P219 H2AFZP5-201ENST00000446960 382 ntBASIC4.14□□□□□ -1.75
CCDC88CQ9P219 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC88CQ9P219 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.14□□□□□ -1.75
CCDC88CQ9P219 RPL7P19-201ENST00000469948 618 ntBASIC4.14□□□□□ -1.75
CCDC88CQ9P219 RNA5SP315-201ENST00000516340 116 ntBASIC4.14□□□□□ -1.75
CCDC88CQ9P219 RNA5SP312-201ENST00000517068 116 ntBASIC4.14□□□□□ -1.75
CCDC88CQ9P219 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC88CQ9P219 AC100770.1-201ENST00000532310 322 ntBASIC4.14□□□□□ -1.75
CCDC88CQ9P219 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC88CQ9P219 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC88CQ9P219 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC88CQ9P219 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC88CQ9P219 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
CCDC88CQ9P219 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC88CQ9P219 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC88CQ9P219 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
CCDC88CQ9P219 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CCDC88CQ9P219 RNA5SP28-201ENST00000363841 119 ntBASIC4.14□□□□□ -1.75
CCDC88CQ9P219 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC88CQ9P219 RNA5SP306-201ENST00000411087 107 ntBASIC4.14□□□□□ -1.75
CCDC88CQ9P219 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC88CQ9P219 NUTF2P3-201ENST00000448540 384 ntBASIC4.14□□□□□ -1.75
CCDC88CQ9P219 AC005008.1-201ENST00000456151 612 ntBASIC4.14□□□□□ -1.75
CCDC88CQ9P219 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC88CQ9P219 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC88CQ9P219 AL109766.1-201ENST00000555080 552 ntBASIC4.14□□□□□ -1.75
CCDC88CQ9P219 AC027455.1-201ENST00000574104 594 ntBASIC4.14□□□□□ -1.75
CCDC88CQ9P219 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC88CQ9P219 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
CCDC88CQ9P219 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC88CQ9P219 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
CCDC88CQ9P219 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC88CQ9P219 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
CCDC88CQ9P219 AC125257.1-201ENST00000560400 2930 ntBASIC4.13□□□□□ -1.75
CCDC88CQ9P219 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CCDC88CQ9P219 Z98745.1-201ENST00000402553 494 ntBASIC4.13□□□□□ -1.75
CCDC88CQ9P219 RPS27AP11-201ENST00000402798 447 ntBASIC4.13□□□□□ -1.75
CCDC88CQ9P219 OR8G2P-201ENST00000412796 908 ntBASIC4.13□□□□□ -1.75
CCDC88CQ9P219 AC004448.2-201ENST00000422360 586 ntBASIC4.13□□□□□ -1.75
CCDC88CQ9P219 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC88CQ9P219 RPL23AP97-201ENST00000568955 471 ntBASIC4.13□□□□□ -1.75
CCDC88CQ9P219 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC88CQ9P219 AC020634.1-201ENST00000608701 549 ntBASIC4.13□□□□□ -1.75
CCDC88CQ9P219 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.13□□□□□ -1.75
CCDC88CQ9P219 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CCDC88CQ9P219 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC88CQ9P219 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.13□□□□□ -1.75
CCDC88CQ9P219 LARP1BP1-201ENST00000506036 1359 ntBASIC4.13□□□□□ -1.75
CCDC88CQ9P219 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC88CQ9P219 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC88CQ9P219 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CCDC88CQ9P219 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms