Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 SUGT1P2-201ENST00000379452 992 ntBASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 Y_RNA.408-201ENST00000383987 102 ntBASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 Y_RNA.436-201ENST00000384097 102 ntBASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 RNA5SP187-201ENST00000384400 119 ntBASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 RNA5SP284-201ENST00000384547 118 ntBASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 RPS3AP26-201ENST00000398259 784 ntBASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 AL157702.1-201ENST00000398764 426 ntBASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 GPS2P1-201ENST00000411761 986 ntBASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 BTF3L4P1-201ENST00000413813 468 ntBASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 DNAJA1P2-201ENST00000421360 1197 ntBASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 AC129850.1-201ENST00000436203 508 ntBASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 AC016772.1-201ENST00000444170 1261 ntBASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 AL161636.2-201ENST00000445179 927 ntBASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 AC243772.1-201ENST00000451620 410 ntBASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 RPS7P6-201ENST00000485777 579 ntBASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 AC011352.3-201ENST00000505162 593 ntBASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 RNA5SP271-201ENST00000516700 88 ntBASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 AKIRIN1P1-201ENST00000547384 544 ntBASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 AC007954.1-201ENST00000554198 494 ntBASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 AC093519.1-201ENST00000566109 298 ntBASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 NANOGP3-201ENST00000605855 286 ntBASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 AC126175.1-201ENST00000617041 758 ntBASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 CASC19-222ENST00000641321 1173 ntBASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 RBMY1HP-201ENST00000382759 1389 ntBASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.52□□□□□ -1.53
CCM2LQ9NUG4 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCM2LQ9NUG4 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.52□□□□□ -1.53
CCM2LQ9NUG4 AC107982.1-201ENST00000507171 1300 ntBASIC5.52□□□□□ -1.53
CCM2LQ9NUG4 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCM2LQ9NUG4 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCM2LQ9NUG4 AC007938.2-201ENST00000604666 2634 ntBASIC5.52□□□□□ -1.53
CCM2LQ9NUG4 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
CCM2LQ9NUG4 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCM2LQ9NUG4 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCM2LQ9NUG4 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
CCM2LQ9NUG4 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCM2LQ9NUG4 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.52□□□□□ -1.53
CCM2LQ9NUG4 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.52□□□□□ -1.53
CCM2LQ9NUG4 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.52□□□□□ -1.53
CCM2LQ9NUG4 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCM2LQ9NUG4 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCM2LQ9NUG4 RNA5SP242-201ENST00000364171 118 ntBASIC5.52□□□□□ -1.53
CCM2LQ9NUG4 RNU4-24P-201ENST00000364565 139 ntBASIC5.52□□□□□ -1.53
CCM2LQ9NUG4 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CCM2LQ9NUG4 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CCM2LQ9NUG4 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.52□□□□□ -1.53
CCM2LQ9NUG4 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.52□□□□□ -1.53
CCM2LQ9NUG4 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC5.52□□□□□ -1.53
CCM2LQ9NUG4 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.52□□□□□ -1.53
CCM2LQ9NUG4 P2RY10P2-201ENST00000416730 913 ntBASIC5.52□□□□□ -1.53
CCM2LQ9NUG4 NMD3P2-201ENST00000421815 761 ntBASIC5.52□□□□□ -1.53
CCM2LQ9NUG4 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.52□□□□□ -1.53
CCM2LQ9NUG4 OR10T1P-201ENST00000424327 947 ntBASIC5.52□□□□□ -1.53
CCM2LQ9NUG4 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.52□□□□□ -1.53
CCM2LQ9NUG4 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.52□□□□□ -1.53
CCM2LQ9NUG4 AL590103.1-201ENST00000434488 307 ntBASIC5.52□□□□□ -1.53
CCM2LQ9NUG4 AC094019.1-201ENST00000434678 472 ntBASIC5.52□□□□□ -1.53
CCM2LQ9NUG4 RPS25P9-201ENST00000435591 252 ntBASIC5.52□□□□□ -1.53
CCM2LQ9NUG4 TUBB4BP6-201ENST00000437576 479 ntBASIC5.52□□□□□ -1.53
CCM2LQ9NUG4 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms