| SALL3 | Q9BXA9 | AC093297.1-201 | ENST00000511712 | 591 nt | TSL 4 BASIC | 5.84 | □□□□□ -1.47 | | |
| SALL3 | Q9BXA9 | RFPL4AP3-201 | ENST00000515267 | 345 nt | BASIC | 5.84 | □□□□□ -1.47 | | |
| SALL3 | Q9BXA9 | AC002428.2-201 | ENST00000522973 | 414 nt | TSL 3 BASIC | 5.84 | □□□□□ -1.47 | | |
| SALL3 | Q9BXA9 | HAUS1P3-201 | ENST00000523909 | 662 nt | BASIC | 5.84 | □□□□□ -1.47 | | |
| SALL3 | Q9BXA9 | LINC02258-201 | ENST00000551280 | 777 nt | TSL 2 BASIC | 5.84 | □□□□□ -1.47 | | |
| SALL3 | Q9BXA9 | AC015912.2-201 | ENST00000571053 | 181 nt | BASIC | 5.84 | □□□□□ -1.47 | | |
| SALL3 | Q9BXA9 | AP001094.1-201 | ENST00000579805 | 193 nt | BASIC | 5.84 | □□□□□ -1.47 | | |
| SALL3 | Q9BXA9 | AC007673.1-201 | ENST00000590604 | 1100 nt | TSL 5 BASIC | 5.84 | □□□□□ -1.47 | | |
| SALL3 | Q9BXA9 | AC018695.3-201 | ENST00000602617 | 408 nt | TSL 2 BASIC | 5.84 | □□□□□ -1.47 | | |
| SALL3 | Q9BXA9 | RNF138P2-201 | ENST00000603490 | 592 nt | BASIC | 5.84 | □□□□□ -1.47 | | |
| SALL3 | Q9BXA9 | AC015849.2-201 | ENST00000605738 | 409 nt | BASIC | 5.84 | □□□□□ -1.47 | | |
| SALL3 | Q9BXA9 | AC021851.1-201 | ENST00000608537 | 1082 nt | BASIC | 5.84 | □□□□□ -1.47 | | |
| SALL3 | Q9BXA9 | AL596220.1-201 | ENST00000622121 | 542 nt | TSL 4 BASIC | 5.84 | □□□□□ -1.47 | | |
| SALL3 | Q9BXA9 | DLG2-AS1_1.1-201 | ENST00000622319 | 213 nt | BASIC | 5.84 | □□□□□ -1.47 | | |
| SALL3 | Q9BXA9 | AC012414.7-202 | ENST00000622705 | 1090 nt | BASIC | 5.84 | □□□□□ -1.47 | | |
| SALL3 | Q9BXA9 | OSER1-AS1-205 | ENST00000623343 | 827 nt | TSL 5 BASIC | 5.84 | □□□□□ -1.47 | | |
| SALL3 | Q9BXA9 | RAB30-212 | ENST00000533486 | 9929 nt | APPRIS P1 TSL 1 (best) BASIC | 5.84 | □□□□□ -1.47 | | |
| SALL3 | Q9BXA9 | MUC12-206 | ENST00000536621 | 16321 nt | APPRIS P2 TSL 5 BASIC | 5.84 | □□□□□ -1.47 | | |
| SALL3 | Q9BXA9 | SEC31A-237 | ENST00000513858 | 3687 nt | TSL 1 (best) BASIC | 5.84 | □□□□□ -1.47 | | |
| SALL3 | Q9BXA9 | CEP295-201 | ENST00000325212 | 8057 nt | APPRIS P2 TSL 2 BASIC | 5.84 | □□□□□ -1.47 | | |
| SALL3 | Q9BXA9 | CCNB3-201 | ENST00000276014 | 4513 nt | APPRIS P1 TSL 1 (best) BASIC | 5.84 | □□□□□ -1.47 | | |
| SALL3 | Q9BXA9 | EYA1-203 | ENST00000388740 | 3788 nt | TSL 5 BASIC | 5.84 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | OR9Q2-202 | ENST00000641291 | 3774 nt | APPRIS P1 BASIC | 5.84 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | AL031119.1-201 | ENST00000404707 | 1879 nt | BASIC | 5.84 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | CSPP1-203 | ENST00000519668 | 3715 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.84 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | IL1RAP-205 | ENST00000412504 | 4875 nt | APPRIS P1 TSL 1 (best) BASIC | 5.84 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | NAMPTP1-201 | ENST00000440465 | 2514 nt | BASIC | 5.84 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | EOGT-209 | ENST00000540955 | 1332 nt | TSL 2 BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | AC007382.1-201 | ENST00000624376 | 2618 nt | BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | CAPZA3-201 | ENST00000317658 | 1087 nt | APPRIS P1 BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | C1orf54-202 | ENST00000369099 | 600 nt | APPRIS P1 TSL 1 (best) BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | RNA5SP87-201 | ENST00000384155 | 118 nt | BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | GPC5-IT1-201 | ENST00000416664 | 658 nt | TSL 3 BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | RPS24P7-201 | ENST00000416921 | 246 nt | BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | AC004543.1-201 | ENST00000418764 | 369 nt | TSL 5 BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | KRR1P1-201 | ENST00000419430 | 803 nt | BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | AC010099.3-201 | ENST00000423896 | 409 nt | BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | RNF19BPX-201 | ENST00000426224 | 625 nt | BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | MTCO3P30-201 | ENST00000426425 | 670 nt | BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | USP9YP14-201 | ENST00000430663 | 563 nt | BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | LINC01745-201 | ENST00000430921 | 372 nt | TSL 5 BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | NMNAT1P2-201 | ENST00000435192 | 860 nt | BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | CR769776.1-201 | ENST00000441254 | 787 nt | BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | RPL31P44-201 | ENST00000447680 | 377 nt | BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | LINC01767-201 | ENST00000451914 | 545 nt | TSL 2 BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | HMGB1P26-201 | ENST00000452520 | 628 nt | BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | AC234781.3-201 | ENST00000452540 | 973 nt | BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | RPS5P7-201 | ENST00000456664 | 608 nt | BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | TPT1P1-201 | ENST00000458495 | 518 nt | BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | FAM104B-204 | ENST00000472571 | 1109 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | HMGB1P38-201 | ENST00000490557 | 577 nt | BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | NDUFA5P12-201 | ENST00000503796 | 343 nt | BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | AC112518.2-201 | ENST00000508565 | 425 nt | BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | AC104119.1-201 | ENST00000508829 | 339 nt | TSL 5 BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | ASNSP4-201 | ENST00000511103 | 447 nt | BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | AC012055.1-201 | ENST00000511346 | 1144 nt | TSL 3 BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | AC138938.1-201 | ENST00000515431 | 782 nt | BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | AC018682.2-201 | ENST00000517716 | 399 nt | TSL 5 BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | CDH12P4-201 | ENST00000517835 | 295 nt | BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | CDH12P3-201 | ENST00000517935 | 295 nt | BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | CDH12P1-201 | ENST00000518435 | 295 nt | BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | AP000676.2-201 | ENST00000529711 | 301 nt | BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | TAT-AS1-201 | ENST00000561529 | 873 nt | TSL 5 BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | AC009852.2-201 | ENST00000567898 | 485 nt | BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | AC100872.1-201 | ENST00000577765 | 501 nt | TSL 5 BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | AC124283.4-201 | ENST00000581815 | 456 nt | BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | MIR4737-201 | ENST00000583979 | 81 nt | BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | MIR3936-201 | ENST00000584304 | 110 nt | BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | AC022145.1-201 | ENST00000600673 | 383 nt | TSL 3 BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | QTRT1P1-201 | ENST00000604344 | 1078 nt | BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | AC026741.1-201 | ENST00000605892 | 482 nt | BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | MIR6748-201 | ENST00000610433 | 71 nt | BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | NAA60-237 | ENST00000615865 | 326 nt | TSL 5 BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | AC090510.2-201 | ENST00000617465 | 629 nt | BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | LINC01709-202 | ENST00000635702 | 1204 nt | TSL 5 BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | OR2M2-203 | ENST00000641836 | 1151 nt | APPRIS P1 BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | NRXN1-242 | ENST00000635519 | 3553 nt | TSL 5 BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | IL1R1-202 | ENST00000409329 | 1862 nt | TSL 5 BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | CNGA1-202 | ENST00000402813 | 2867 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | LIPI-204 | ENST00000614229 | 1439 nt | TSL 1 (best) BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | LINC01689-201 | ENST00000416218 | 2007 nt | TSL 1 (best) BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | TLK1-212 | ENST00000521943 | 2605 nt | TSL 2 BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | CALN1-203 | ENST00000395276 | 9189 nt | APPRIS P3 TSL 1 (best) BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | AFF2-201 | ENST00000286437 | 12280 nt | TSL 2 BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | TANK-205 | ENST00000405852 | 2155 nt | TSL 5 BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | SLC4A7-206 | ENST00000428386 | 7385 nt | TSL 1 (best) BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | DICER1-212 | ENST00000541352 | 5621 nt | TSL 1 (best) BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | ADAMDEC1-201 | ENST00000256412 | 2348 nt | APPRIS P3 TSL 1 (best) BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | G3BP1-202 | ENST00000394123 | 10240 nt | APPRIS P1 TSL 1 (best) BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | SPATA1-206 | ENST00000490879 | 2888 nt | APPRIS P1 TSL 5 BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | TDO2-208 | ENST00000536354 | 1701 nt | APPRIS P1 TSL 1 (best) BASIC | 5.83 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | CLVS1-205 | ENST00000519846 | 3622 nt | APPRIS P1 TSL 5 BASIC | 5.82 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | AC011503.2-201 | ENST00000594230 | 1500 nt | BASIC | 5.82 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | AC112255.1-201 | ENST00000624070 | 2493 nt | BASIC | 5.82 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | PCDH18-202 | ENST00000412923 | 5102 nt | APPRIS ALT1 TSL 1 (best) BASIC | 5.82 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | ZEB2-241 | ENST00000637304 | 9158 nt | TSL 5 BASIC | 5.82 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | CD69-201 | ENST00000228434 | 1676 nt | APPRIS P1 TSL 1 (best) BASIC | 5.82 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | PCGF5-205 | ENST00000614189 | 7037 nt | APPRIS P1 TSL 1 (best) BASIC | 5.82 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | ADAM18-201 | ENST00000265707 | 2388 nt | APPRIS P3 TSL 1 (best) BASIC | 5.82 | □□□□□ -1.48 | | |
| SALL3 | Q9BXA9 | C11orf74-201 | ENST00000334307 | 863 nt | APPRIS P3 TSL 1 (best) BASIC | 5.82 | □□□□□ -1.48 | | |