Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CHMP4CQ96CF2 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 BMPR1APS1-201ENST00000403332 1598 ntBASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 AC097461.1-201ENST00000568928 2821 ntBASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 RNU6-543P-201ENST00000362576 108 ntBASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 MIR525-201ENST00000384978 85 ntBASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 MIR600-201ENST00000385007 98 ntBASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 MIR589-201ENST00000385238 99 ntBASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 AL592310.1-201ENST00000414330 671 ntBASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 AL590762.4-201ENST00000425885 253 ntBASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 YWHAEP5-201ENST00000431545 765 ntBASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 GTF2IP3-201ENST00000433887 494 ntBASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 CLUHP1-201ENST00000435012 1190 ntBASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 AP000936.3-201ENST00000438127 255 ntBASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 AC002542.1-201ENST00000440683 193 ntBASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 MTND1P33-201ENST00000446251 917 ntBASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 AC022431.1-201ENST00000450941 438 ntBASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 OFD1P7Y-201ENST00000454643 1155 ntBASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 RPS3AP6-201ENST00000484430 795 ntBASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 AC008565.1-201ENST00000509046 885 ntBASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 AC100871.1-201ENST00000507871 1456 ntBASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC6.19□□□□□ -1.42
CHMP4CQ96CF2 HSPA8P17-201ENST00000427029 1382 ntBASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 STX3-208ENST00000641815 3236 ntBASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 PHACTR2P1-201ENST00000605639 1414 ntBASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 AP002530.1-201ENST00000405705 684 ntBASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 AC092745.2-202ENST00000411880 369 ntBASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 BTF3P8-201ENST00000414577 526 ntBASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 OR5M12P-201ENST00000423388 929 ntBASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 AC093655.2-201ENST00000425735 631 ntBASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 RPL12P3-201ENST00000440080 396 ntBASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 OR10R1P-201ENST00000441524 1141 ntBASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 TCEA1P3-201ENST00000443005 880 ntBASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 AC092647.2-201ENST00000452998 253 ntBASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 AC021660.1-201ENST00000465006 554 ntBASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 RPL7AP6-201ENST00000477943 801 ntBASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 COX6B1P2-201ENST00000489624 230 ntBASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 MYL12BP2-201ENST00000503948 512 ntBASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 RPS4XP20-201ENST00000505751 772 ntBASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 AC113420.1-201ENST00000507903 571 ntBASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 RNU6-513P-201ENST00000516104 104 ntBASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 RNU6-311P-201ENST00000516224 102 ntBASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC6.18□□□□□ -1.42
CHMP4CQ96CF2 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms