Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 IGKV1OR2-11-201ENST00000604120 287 ntBASIC6.1□□□□□ -1.43
ERCC4Q92889 AL392112.1-201ENST00000605115 829 ntBASIC6.1□□□□□ -1.43
ERCC4Q92889 AC139769.3-201ENST00000618383 175 ntBASIC6.1□□□□□ -1.43
ERCC4Q92889 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
ERCC4Q92889 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.1□□□□□ -1.43
ERCC4Q92889 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.1□□□□□ -1.43
ERCC4Q92889 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ERCC4Q92889 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
ERCC4Q92889 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
ERCC4Q92889 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ERCC4Q92889 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC6.1□□□□□ -1.43
ERCC4Q92889 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ERCC4Q92889 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ERCC4Q92889 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ERCC4Q92889 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
ERCC4Q92889 AC073055.1-201ENST00000456901 1621 ntBASIC6.1□□□□□ -1.43
ERCC4Q92889 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ERCC4Q92889 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ERCC4Q92889 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.09□□□□□ -1.43
ERCC4Q92889 ZNF542P-204ENST00000482727 1305 ntBASIC6.09□□□□□ -1.43
ERCC4Q92889 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC6.09□□□□□ -1.43
ERCC4Q92889 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ERCC4Q92889 NAP1L4P1-201ENST00000319092 1157 ntBASIC6.09□□□□□ -1.43
ERCC4Q92889 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
ERCC4Q92889 Y_RNA.51-201ENST00000362725 102 ntBASIC6.09□□□□□ -1.43
ERCC4Q92889 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ERCC4Q92889 RNU6-157P-201ENST00000383957 107 ntBASIC6.09□□□□□ -1.43
ERCC4Q92889 MIR142-201ENST00000384835 87 ntBASIC6.09□□□□□ -1.43
ERCC4Q92889 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
ERCC4Q92889 AL079342.2-201ENST00000403367 482 ntBASIC6.09□□□□□ -1.43
ERCC4Q92889 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC6.09□□□□□ -1.43
ERCC4Q92889 MTCO3P30-201ENST00000426425 670 ntBASIC6.09□□□□□ -1.43
ERCC4Q92889 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC6.09□□□□□ -1.43
ERCC4Q92889 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.09□□□□□ -1.43
ERCC4Q92889 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC6.09□□□□□ -1.43
ERCC4Q92889 AC019185.1-201ENST00000442718 389 ntBASIC6.09□□□□□ -1.43
ERCC4Q92889 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.09□□□□□ -1.43
ERCC4Q92889 AC016772.1-201ENST00000444170 1261 ntBASIC6.09□□□□□ -1.43
ERCC4Q92889 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC6.09□□□□□ -1.43
ERCC4Q92889 AL450023.1-201ENST00000450868 751 ntBASIC6.09□□□□□ -1.43
ERCC4Q92889 AC011476.1-201ENST00000466725 307 ntBASIC6.09□□□□□ -1.43
ERCC4Q92889 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.09□□□□□ -1.43
ERCC4Q92889 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC6.09□□□□□ -1.43
ERCC4Q92889 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ERCC4Q92889 RAD21-204ENST00000518055 896 ntTSL 2 BASIC6.09□□□□□ -1.43
ERCC4Q92889 IGHV3-63-201ENST00000518422 341 ntBASIC6.09□□□□□ -1.43
ERCC4Q92889 CDC42P3-201ENST00000518493 633 ntBASIC6.09□□□□□ -1.43
ERCC4Q92889 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC6.09□□□□□ -1.43
ERCC4Q92889 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC6.09□□□□□ -1.43
ERCC4Q92889 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC6.09□□□□□ -1.43
ERCC4Q92889 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC6.09□□□□□ -1.43
ERCC4Q92889 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.09□□□□□ -1.43
ERCC4Q92889 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.09□□□□□ -1.43
ERCC4Q92889 AC100767.2-201ENST00000604840 693 ntBASIC6.09□□□□□ -1.43
ERCC4Q92889 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
ERCC4Q92889 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
ERCC4Q92889 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
ERCC4Q92889 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ERCC4Q92889 BTBD10P1-201ENST00000549824 1352 ntBASIC6.08□□□□□ -1.44
ERCC4Q92889 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC6.08□□□□□ -1.44
ERCC4Q92889 UQCRC2P1-201ENST00000417777 1332 ntBASIC6.08□□□□□ -1.44
ERCC4Q92889 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
ERCC4Q92889 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.08□□□□□ -1.44
ERCC4Q92889 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ERCC4Q92889 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ERCC4Q92889 RNU4-44P-201ENST00000363050 141 ntBASIC6.08□□□□□ -1.44
ERCC4Q92889 RNU4-4P-201ENST00000364588 130 ntBASIC6.08□□□□□ -1.44
ERCC4Q92889 MIR137-201ENST00000385223 102 ntBASIC6.08□□□□□ -1.44
ERCC4Q92889 ATP5F1P3-201ENST00000397213 657 ntBASIC6.08□□□□□ -1.44
ERCC4Q92889 NUDT19P3-201ENST00000404698 555 ntBASIC6.08□□□□□ -1.44
ERCC4Q92889 RPL12P9-201ENST00000412942 488 ntBASIC6.08□□□□□ -1.44
ERCC4Q92889 TIMM9P2-201ENST00000419324 266 ntBASIC6.08□□□□□ -1.44
ERCC4Q92889 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6.08□□□□□ -1.44
ERCC4Q92889 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC6.08□□□□□ -1.44
ERCC4Q92889 AL133173.1-201ENST00000423458 397 ntBASIC6.08□□□□□ -1.44
ERCC4Q92889 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC6.08□□□□□ -1.44
ERCC4Q92889 AL035407.1-201ENST00000429211 571 ntBASIC6.08□□□□□ -1.44
ERCC4Q92889 RPL7AP49-201ENST00000429522 581 ntBASIC6.08□□□□□ -1.44
ERCC4Q92889 AL591438.1-201ENST00000433508 581 ntBASIC6.08□□□□□ -1.44
ERCC4Q92889 HMGB3P10-201ENST00000434734 572 ntBASIC6.08□□□□□ -1.44
ERCC4Q92889 AL591623.2-201ENST00000449978 222 ntBASIC6.08□□□□□ -1.44
ERCC4Q92889 ATP5A1P7-201ENST00000453978 1279 ntBASIC6.08□□□□□ -1.44
ERCC4Q92889 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC6.08□□□□□ -1.44
ERCC4Q92889 AC069304.1-201ENST00000491593 704 ntBASIC6.08□□□□□ -1.44
ERCC4Q92889 AL049874.2-201ENST00000492636 288 ntBASIC6.08□□□□□ -1.44
ERCC4Q92889 RPL15P21-201ENST00000495592 567 ntBASIC6.08□□□□□ -1.44
ERCC4Q92889 IMPA1P1-201ENST00000510718 842 ntBASIC6.08□□□□□ -1.44
ERCC4Q92889 snoZ278.1-201ENST00000517059 112 ntBASIC6.08□□□□□ -1.44
ERCC4Q92889 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC6.08□□□□□ -1.44
ERCC4Q92889 CASC19-203ENST00000523510 575 ntTSL 3 BASIC6.08□□□□□ -1.44
ERCC4Q92889 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC6.08□□□□□ -1.44
ERCC4Q92889 AP004607.2-201ENST00000533949 322 ntBASIC6.08□□□□□ -1.44
ERCC4Q92889 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.08□□□□□ -1.44
ERCC4Q92889 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC6.08□□□□□ -1.44
ERCC4Q92889 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC6.08□□□□□ -1.44
ERCC4Q92889 ATP5F1P7-201ENST00000567330 760 ntBASIC6.08□□□□□ -1.44
ERCC4Q92889 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.08□□□□□ -1.44
ERCC4Q92889 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC6.08□□□□□ -1.44
ERCC4Q92889 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC6.08□□□□□ -1.44
ERCC4Q92889 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms