Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AC010680.3-201ENST00000604215 520 ntBASIC4.35□□□□□ -1.71
CLHC1Q8NHS4 AC133644.2-201ENST00000608142 540 ntBASIC4.35□□□□□ -1.71
CLHC1Q8NHS4 AC091905.2-201ENST00000623143 306 ntBASIC4.35□□□□□ -1.71
CLHC1Q8NHS4 CFTRP2-201ENST00000634304 199 ntBASIC4.35□□□□□ -1.71
CLHC1Q8NHS4 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLHC1Q8NHS4 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.35□□□□□ -1.71
CLHC1Q8NHS4 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.35□□□□□ -1.71
CLHC1Q8NHS4 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLHC1Q8NHS4 NXPH1-205ENST00000602349 1953 ntBASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 A2MP1-204ENST00000566278 4130 ntBASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 AC010132.2-201ENST00000295493 1043 ntBASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 RN7SKP44-201ENST00000363602 316 ntBASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 RNA5SP372-201ENST00000390836 115 ntBASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 AL109941.1-201ENST00000401925 229 ntBASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 AL078604.1-201ENST00000404609 466 ntBASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 RN7SKP100-201ENST00000411258 284 ntBASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 CEACAMP8-201ENST00000413902 580 ntBASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 PA2G4P6-201ENST00000438325 1197 ntBASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 PTMAP6-201ENST00000439110 327 ntBASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 SCARNA10-201ENST00000459255 330 ntBASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 AC108022.1-201ENST00000493466 478 ntBASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 VWA8P1-201ENST00000510889 176 ntBASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 AC007016.1-201ENST00000512110 244 ntBASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 AC087888.1-201ENST00000550884 1254 ntBASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 EDDM3DP-201ENST00000554692 434 ntBASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 GLRXP2-201ENST00000555594 321 ntBASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 HMGB2P1-201ENST00000591146 634 ntBASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 OR7E18P-201ENST00000592589 702 ntBASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 AC098935.2-201ENST00000604222 466 ntBASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 AL139286.1-201ENST00000604465 483 ntBASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 AL353726.1-201ENST00000614041 1000 ntBASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 AC018445.2-201ENST00000622987 260 ntBASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 AC145207.9-201ENST00000623802 325 ntBASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 HCFC2P1-201ENST00000392864 1592 ntBASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CLHC1Q8NHS4 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.34□□□□□ -1.72
CLHC1Q8NHS4 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.34□□□□□ -1.72
CLHC1Q8NHS4 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.33□□□□□ -1.72
CLHC1Q8NHS4 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.33□□□□□ -1.72
CLHC1Q8NHS4 AC139769.1-204ENST00000472297 1931 ntBASIC4.33□□□□□ -1.72
CLHC1Q8NHS4 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.33□□□□□ -1.72
CLHC1Q8NHS4 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CLHC1Q8NHS4 AC021146.4-201ENST00000309229 279 ntBASIC4.33□□□□□ -1.72
CLHC1Q8NHS4 AL645927.1-201ENST00000396783 406 ntBASIC4.33□□□□□ -1.72
CLHC1Q8NHS4 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
CLHC1Q8NHS4 FCF1P5-201ENST00000406490 482 ntBASIC4.33□□□□□ -1.72
CLHC1Q8NHS4 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.33□□□□□ -1.72
CLHC1Q8NHS4 BX510359.2-201ENST00000417920 305 ntBASIC4.33□□□□□ -1.72
CLHC1Q8NHS4 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.33□□□□□ -1.72
CLHC1Q8NHS4 RPS12P10-201ENST00000427031 377 ntBASIC4.33□□□□□ -1.72
CLHC1Q8NHS4 MTCO3P21-201ENST00000430791 643 ntBASIC4.33□□□□□ -1.72
CLHC1Q8NHS4 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.33□□□□□ -1.72
CLHC1Q8NHS4 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.33□□□□□ -1.72
CLHC1Q8NHS4 RPL31P44-201ENST00000447680 377 ntBASIC4.33□□□□□ -1.72
CLHC1Q8NHS4 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CLHC1Q8NHS4 RPL7P61-201ENST00000451721 751 ntBASIC4.33□□□□□ -1.72
CLHC1Q8NHS4 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CLHC1Q8NHS4 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.33□□□□□ -1.72
CLHC1Q8NHS4 AL645939.1-201ENST00000453429 797 ntBASIC4.33□□□□□ -1.72
CLHC1Q8NHS4 AL121877.1-201ENST00000453704 622 ntBASIC4.33□□□□□ -1.72
CLHC1Q8NHS4 AC091685.2-201ENST00000454924 864 ntBASIC4.33□□□□□ -1.72
CLHC1Q8NHS4 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.33□□□□□ -1.72
CLHC1Q8NHS4 AC090013.1-201ENST00000485147 480 ntBASIC4.33□□□□□ -1.72
CLHC1Q8NHS4 MTND4LP2-201ENST00000502312 285 ntBASIC4.33□□□□□ -1.72
CLHC1Q8NHS4 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CLHC1Q8NHS4 OR7H2P-201ENST00000513483 306 ntBASIC4.33□□□□□ -1.72
CLHC1Q8NHS4 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.33□□□□□ -1.72
CLHC1Q8NHS4 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CLHC1Q8NHS4 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.33□□□□□ -1.72
CLHC1Q8NHS4 RPL7P50-201ENST00000600588 727 ntBASIC4.33□□□□□ -1.72
CLHC1Q8NHS4 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.33□□□□□ -1.72
CLHC1Q8NHS4 AC023762.1-201ENST00000603280 584 ntBASIC4.33□□□□□ -1.72
CLHC1Q8NHS4 AC013244.1-201ENST00000604279 193 ntBASIC4.33□□□□□ -1.72
CLHC1Q8NHS4 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.33□□□□□ -1.72
CLHC1Q8NHS4 AC091979.2-201ENST00000607514 214 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms