Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 MIR525-201ENST00000384978 85 ntBASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 MIR143-201ENST00000385300 106 ntBASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 MTCO3P41-201ENST00000414801 328 ntBASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 AL035660.1-201ENST00000422041 222 ntBASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 OR5AW1P-201ENST00000426334 1006 ntBASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 CRIP1P1-201ENST00000427567 185 ntBASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 C8orf59P1-201ENST00000429930 303 ntBASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 NANOGP2-201ENST00000435391 727 ntBASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 AP006222.1-205ENST00000450734 457 ntBASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 OTX2P1-201ENST00000450956 354 ntBASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 VN1R32P-201ENST00000452234 905 ntBASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 AC005229.2-201ENST00000456995 399 ntBASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 RPS23P6-201ENST00000466136 431 ntBASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 RN7SL717P-201ENST00000478343 297 ntBASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 RN7SL273P-201ENST00000481561 299 ntBASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 AC099521.1-201ENST00000482557 334 ntBASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 PDCL3P4-201ENST00000489621 720 ntBASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 NDUFS5P6-201ENST00000529136 295 ntBASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 AC007115.1-201ENST00000546853 234 ntBASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 EIF1P6-201ENST00000600054 334 ntBASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 AL590229.1-201ENST00000603497 542 ntBASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 AL138478.1-201ENST00000612252 832 ntBASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 AL512624.1-201ENST00000613638 469 ntBASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 AL157770.1-201ENST00000623049 439 ntBASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 AP003072.4-201ENST00000624580 310 ntBASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 AL390237.1-201ENST00000404226 1415 ntBASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 ECM1P2-201ENST00000503354 1577 ntBASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 AC090017.1-201ENST00000548612 1779 ntBASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SIMC1Q8NDZ2 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.36□□□□□ -1.55
SIMC1Q8NDZ2 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.36□□□□□ -1.55
SIMC1Q8NDZ2 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SIMC1Q8NDZ2 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SIMC1Q8NDZ2 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SIMC1Q8NDZ2 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SIMC1Q8NDZ2 AC239868.2-201ENST00000564237 4527 ntBASIC5.36□□□□□ -1.55
SIMC1Q8NDZ2 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SIMC1Q8NDZ2 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SIMC1Q8NDZ2 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SIMC1Q8NDZ2 OR52B3P-201ENST00000314715 928 ntBASIC5.36□□□□□ -1.55
SIMC1Q8NDZ2 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SIMC1Q8NDZ2 RNU4-4P-201ENST00000364588 130 ntBASIC5.36□□□□□ -1.55
SIMC1Q8NDZ2 MIR130A-201ENST00000385274 89 ntBASIC5.36□□□□□ -1.55
SIMC1Q8NDZ2 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
SIMC1Q8NDZ2 RPL7P27-201ENST00000403775 720 ntBASIC5.36□□□□□ -1.55
SIMC1Q8NDZ2 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC5.36□□□□□ -1.55
SIMC1Q8NDZ2 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.36□□□□□ -1.55
SIMC1Q8NDZ2 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.36□□□□□ -1.55
SIMC1Q8NDZ2 AC004022.2-201ENST00000413824 193 ntBASIC5.36□□□□□ -1.55
SIMC1Q8NDZ2 UBE2V1P10-201ENST00000414685 269 ntBASIC5.36□□□□□ -1.55
SIMC1Q8NDZ2 METTL15P3-201ENST00000415522 1221 ntBASIC5.36□□□□□ -1.55
SIMC1Q8NDZ2 ZNF736P2Y-201ENST00000416040 1279 ntBASIC5.36□□□□□ -1.55
SIMC1Q8NDZ2 AC127526.2-201ENST00000426436 775 ntBASIC5.36□□□□□ -1.55
SIMC1Q8NDZ2 HMGB3P24-201ENST00000433260 622 ntBASIC5.36□□□□□ -1.55
SIMC1Q8NDZ2 AC098826.1-201ENST00000433943 471 ntBASIC5.36□□□□□ -1.55
SIMC1Q8NDZ2 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.36□□□□□ -1.55
SIMC1Q8NDZ2 AC068135.1-201ENST00000446164 246 ntBASIC5.36□□□□□ -1.55
SIMC1Q8NDZ2 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.36□□□□□ -1.55
SIMC1Q8NDZ2 RNU1-88P-201ENST00000459274 128 ntBASIC5.36□□□□□ -1.55
SIMC1Q8NDZ2 AL136038.1-201ENST00000497246 351 ntBASIC5.36□□□□□ -1.55
SIMC1Q8NDZ2 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC5.36□□□□□ -1.55
SIMC1Q8NDZ2 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC5.36□□□□□ -1.55
SIMC1Q8NDZ2 GLUD1P3-202ENST00000508551 200 ntBASIC5.36□□□□□ -1.55
SIMC1Q8NDZ2 AC008565.1-201ENST00000509046 885 ntBASIC5.36□□□□□ -1.55
SIMC1Q8NDZ2 AC116353.3-201ENST00000511215 249 ntBASIC5.36□□□□□ -1.55
SIMC1Q8NDZ2 SCARNA6.1-201ENST00000516989 238 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms