Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 AC090819.1-201ENST00000523800 1111 ntBASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 AP000827.1-201ENST00000527814 258 ntBASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 AC008759.1-201ENST00000589783 983 ntBASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 AC010615.3-201ENST00000597319 394 ntBASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 AC010201.1-201ENST00000605051 540 ntBASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 AC020634.1-201ENST00000608701 549 ntBASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 AL353726.1-201ENST00000614041 1000 ntBASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 AP005019.3-201ENST00000620418 560 ntBASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC65Q8IXS2 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC65Q8IXS2 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC65Q8IXS2 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
CCDC65Q8IXS2 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC65Q8IXS2 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC65Q8IXS2 AC012020.1-201ENST00000624541 1728 ntBASIC4.95□□□□□ -1.62
CCDC65Q8IXS2 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC65Q8IXS2 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
CCDC65Q8IXS2 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC65Q8IXS2 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC65Q8IXS2 RNA5SP307-201ENST00000362863 116 ntBASIC4.95□□□□□ -1.62
CCDC65Q8IXS2 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CCDC65Q8IXS2 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CCDC65Q8IXS2 GLULP6-201ENST00000399502 913 ntBASIC4.95□□□□□ -1.62
CCDC65Q8IXS2 RPL23AP48-201ENST00000406913 488 ntBASIC4.95□□□□□ -1.62
CCDC65Q8IXS2 AL590139.1-201ENST00000416267 400 ntBASIC4.95□□□□□ -1.62
CCDC65Q8IXS2 ARAFP1-201ENST00000422172 605 ntBASIC4.95□□□□□ -1.62
CCDC65Q8IXS2 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC65Q8IXS2 CENPIP1-201ENST00000425713 902 ntBASIC4.95□□□□□ -1.62
CCDC65Q8IXS2 NDUFA5P1-201ENST00000433858 341 ntBASIC4.95□□□□□ -1.62
CCDC65Q8IXS2 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC65Q8IXS2 ARL2BPP10-201ENST00000446487 531 ntBASIC4.95□□□□□ -1.62
CCDC65Q8IXS2 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC65Q8IXS2 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC65Q8IXS2 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC65Q8IXS2 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC65Q8IXS2 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
CCDC65Q8IXS2 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC65Q8IXS2 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC65Q8IXS2 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.95□□□□□ -1.62
CCDC65Q8IXS2 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC65Q8IXS2 AL159169.2-201ENST00000610061 1269 ntBASIC4.95□□□□□ -1.62
CCDC65Q8IXS2 AP005212.4-201ENST00000614206 710 ntBASIC4.95□□□□□ -1.62
CCDC65Q8IXS2 AC007546.2-201ENST00000623996 360 ntBASIC4.95□□□□□ -1.62
CCDC65Q8IXS2 AL592148.3-201ENST00000608771 2646 ntBASIC4.95□□□□□ -1.62
CCDC65Q8IXS2 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC65Q8IXS2 SYT14P1-202ENST00000600441 1448 ntBASIC4.95□□□□□ -1.62
CCDC65Q8IXS2 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
CCDC65Q8IXS2 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC65Q8IXS2 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
CCDC65Q8IXS2 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC65Q8IXS2 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC65Q8IXS2 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC65Q8IXS2 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
CCDC65Q8IXS2 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CCDC65Q8IXS2 RNA5SP22-201ENST00000365393 109 ntBASIC4.94□□□□□ -1.62
CCDC65Q8IXS2 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC65Q8IXS2 SNORA74C-2-201ENST00000411179 201 ntBASIC4.94□□□□□ -1.62
CCDC65Q8IXS2 OR2X1P-201ENST00000421144 687 ntBASIC4.94□□□□□ -1.62
CCDC65Q8IXS2 RPL7AP25-201ENST00000423357 805 ntBASIC4.94□□□□□ -1.62
CCDC65Q8IXS2 MTCO1P51-201ENST00000427672 1060 ntBASIC4.94□□□□□ -1.62
CCDC65Q8IXS2 AC099063.2-201ENST00000446360 662 ntBASIC4.94□□□□□ -1.62
CCDC65Q8IXS2 AC005008.1-201ENST00000456151 612 ntBASIC4.94□□□□□ -1.62
CCDC65Q8IXS2 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.94□□□□□ -1.62
CCDC65Q8IXS2 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC4.94□□□□□ -1.62
CCDC65Q8IXS2 AC113398.2-201ENST00000507630 558 ntBASIC4.94□□□□□ -1.62
CCDC65Q8IXS2 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.94□□□□□ -1.62
CCDC65Q8IXS2 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.94□□□□□ -1.62
CCDC65Q8IXS2 snoU109.6-201ENST00000516831 118 ntBASIC4.94□□□□□ -1.62
CCDC65Q8IXS2 VTA1P2-201ENST00000520205 911 ntBASIC4.94□□□□□ -1.62
CCDC65Q8IXS2 AC025423.2-201ENST00000537570 439 ntBASIC4.94□□□□□ -1.62
CCDC65Q8IXS2 AC063949.1-201ENST00000552900 865 ntBASIC4.94□□□□□ -1.62
CCDC65Q8IXS2 AC008782.1-201ENST00000603386 430 ntBASIC4.94□□□□□ -1.62
CCDC65Q8IXS2 AC090948.2-201ENST00000607363 564 ntBASIC4.94□□□□□ -1.62
CCDC65Q8IXS2 uc_338.18-201ENST00000615451 175 ntBASIC4.94□□□□□ -1.62
CCDC65Q8IXS2 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC65Q8IXS2 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC65Q8IXS2 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.94□□□□□ -1.62
CCDC65Q8IXS2 AC027290.2-201ENST00000623210 18662 ntBASIC4.94□□□□□ -1.62
CCDC65Q8IXS2 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC65Q8IXS2 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC65Q8IXS2 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.94□□□□□ -1.62
CCDC65Q8IXS2 OR56B2P-202ENST00000641377 2453 ntBASIC4.94□□□□□ -1.62
CCDC65Q8IXS2 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.94□□□□□ -1.62
CCDC65Q8IXS2 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC65Q8IXS2 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC65Q8IXS2 AC103591.2-201ENST00000265259 766 ntBASIC4.93□□□□□ -1.62
CCDC65Q8IXS2 RNA5SP146-201ENST00000410743 123 ntBASIC4.93□□□□□ -1.62
CCDC65Q8IXS2 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC65Q8IXS2 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC65Q8IXS2 AC006065.1-201ENST00000422539 802 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms