Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC002075.1-201ENST00000457396 676 ntBASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 PNPLA4P1-201ENST00000458328 305 ntBASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 AC007998.1-201ENST00000474156 672 ntBASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 RPL7P41-201ENST00000485823 957 ntBASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 AC006499.5-201ENST00000505037 514 ntBASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 SNORD46.2-201ENST00000516021 102 ntBASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 RN7SKP31-201ENST00000516354 278 ntBASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 OR4A43P-201ENST00000532938 908 ntBASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 OR7K1P-201ENST00000546439 926 ntBASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 AC074029.1-201ENST00000552531 1044 ntBASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 POLR2KP1-201ENST00000553226 168 ntBASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 GTF2IP22-201ENST00000554443 182 ntBASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 MTCO3P24-201ENST00000572729 782 ntBASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 AC009237.13-201ENST00000603193 276 ntBASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 AP003973.1-201ENST00000604639 691 ntBASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 NDUFA8P1-201ENST00000605525 367 ntBASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 AC005962.2-201ENST00000611427 652 ntBASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 AC024941.1-201ENST00000612250 334 ntBASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 U1.25-201ENST00000614085 162 ntBASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 MIR7844-201ENST00000616161 122 ntBASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 U1.31-201ENST00000620022 160 ntBASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 AC073348.1-201ENST00000623002 331 ntBASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 SEPT14P19-203ENST00000633205 211 ntBASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM48Q8IWZ4 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 CASC19-260ENST00000641828 2001 ntBASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 OR10J6P-201ENST00000289731 930 ntBASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 RNU6-374P-201ENST00000364146 108 ntBASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 CYCSP45-201ENST00000402289 315 ntBASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 RPS3AP2-201ENST00000407190 754 ntBASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 NACAP7-201ENST00000407371 609 ntBASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 MIR548F1-201ENST00000408667 84 ntBASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 ATG4AP1-201ENST00000416893 538 ntBASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 FNDC3CP-201ENST00000420795 1155 ntBASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 AL731534.1-201ENST00000434711 269 ntBASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 RPL23AP19-201ENST00000436229 369 ntBASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 AC241584.1-201ENST00000438469 1241 ntBASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 SETP20-201ENST00000457046 852 ntBASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 snoU13.29-201ENST00000459370 104 ntBASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 MTAPP1-201ENST00000489154 819 ntBASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 RPS4XP15-201ENST00000489210 795 ntBASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 MTND2P33-201ENST00000506452 1031 ntBASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 OR11J2P-201ENST00000555298 907 ntBASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 AC068135.2-201ENST00000569293 1028 ntBASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 TXNP4-201ENST00000575018 310 ntBASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 AP005262.1-201ENST00000582646 997 ntBASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 AC015871.2-201ENST00000603605 948 ntBASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 CASC19-248ENST00000641674 1356 ntBASIC5.77□□□□□ -1.49
TRIM48Q8IWZ4 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms