Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 RNU1-108P-201ENST00000362556 161 ntBASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 SNORA70F-201ENST00000384142 135 ntBASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 HSPD1P16-201ENST00000402302 394 ntBASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 VN1R8P-201ENST00000407739 893 ntBASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 UQCRBP1-201ENST00000421129 336 ntBASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 AL158073.1-201ENST00000426848 1104 ntBASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 AC073587.1-201ENST00000447093 876 ntBASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 HMGB3P13-201ENST00000511263 607 ntBASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 AC015795.1-201ENST00000513669 327 ntBASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 IGLV3-26-201ENST00000520756 302 ntBASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 AC090819.1-201ENST00000523800 1111 ntBASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 AC234775.3-201ENST00000564612 656 ntBASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 MTND6P33-201ENST00000571794 183 ntBASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 AC069061.3-201ENST00000582254 823 ntBASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 MIR6891-201ENST00000618788 93 ntBASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 AL049536.1-201ENST00000625043 744 ntBASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 AC010300.1-201ENST00000600671 5134 ntBASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CDKL3Q8IVW4 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDKL3Q8IVW4 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.53□□□□□ -1.68
CDKL3Q8IVW4 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.53□□□□□ -1.68
CDKL3Q8IVW4 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDKL3Q8IVW4 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CDKL3Q8IVW4 RNU1-15P-201ENST00000353977 144 ntBASIC4.53□□□□□ -1.68
CDKL3Q8IVW4 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.53□□□□□ -1.68
CDKL3Q8IVW4 MIR1911-201ENST00000410783 80 ntBASIC4.53□□□□□ -1.68
CDKL3Q8IVW4 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.53□□□□□ -1.68
CDKL3Q8IVW4 RPEP2-201ENST00000432149 701 ntBASIC4.53□□□□□ -1.68
CDKL3Q8IVW4 NDUFA5P1-201ENST00000433858 341 ntBASIC4.53□□□□□ -1.68
CDKL3Q8IVW4 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.53□□□□□ -1.68
CDKL3Q8IVW4 AC114495.1-201ENST00000441274 436 ntBASIC4.53□□□□□ -1.68
CDKL3Q8IVW4 FHP1-201ENST00000442741 703 ntBASIC4.53□□□□□ -1.68
CDKL3Q8IVW4 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.53□□□□□ -1.68
CDKL3Q8IVW4 AL035551.1-201ENST00000446931 348 ntBASIC4.53□□□□□ -1.68
CDKL3Q8IVW4 RPS23P1-201ENST00000491662 432 ntBASIC4.53□□□□□ -1.68
CDKL3Q8IVW4 RN7SL812P-201ENST00000493791 279 ntBASIC4.53□□□□□ -1.68
CDKL3Q8IVW4 VTA1P2-201ENST00000520205 911 ntBASIC4.53□□□□□ -1.68
CDKL3Q8IVW4 AP000827.1-201ENST00000527814 258 ntBASIC4.53□□□□□ -1.68
CDKL3Q8IVW4 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.53□□□□□ -1.68
CDKL3Q8IVW4 MIR4700-201ENST00000578311 74 ntBASIC4.53□□□□□ -1.68
CDKL3Q8IVW4 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC4.53□□□□□ -1.68
CDKL3Q8IVW4 AC005229.3-201ENST00000603438 323 ntBASIC4.53□□□□□ -1.68
CDKL3Q8IVW4 AC087283.1-201ENST00000604029 1074 ntBASIC4.53□□□□□ -1.68
CDKL3Q8IVW4 AL353600.1-201ENST00000608148 251 ntBASIC4.53□□□□□ -1.68
CDKL3Q8IVW4 AC100847.1-201ENST00000611316 481 ntBASIC4.53□□□□□ -1.68
CDKL3Q8IVW4 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CDKL3Q8IVW4 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.53□□□□□ -1.68
CDKL3Q8IVW4 AL451142.2-201ENST00000429076 2090 ntBASIC4.53□□□□□ -1.68
CDKL3Q8IVW4 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CDKL3Q8IVW4 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDKL3Q8IVW4 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDKL3Q8IVW4 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CDKL3Q8IVW4 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDKL3Q8IVW4 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CDKL3Q8IVW4 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDKL3Q8IVW4 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
CDKL3Q8IVW4 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDKL3Q8IVW4 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDKL3Q8IVW4 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDKL3Q8IVW4 MIR708-201ENST00000390708 88 ntBASIC4.52□□□□□ -1.69
CDKL3Q8IVW4 AL035419.1-201ENST00000397037 564 ntBASIC4.52□□□□□ -1.69
CDKL3Q8IVW4 AL133270.1-201ENST00000402635 279 ntBASIC4.52□□□□□ -1.69
CDKL3Q8IVW4 AL139039.2-201ENST00000407436 479 ntBASIC4.52□□□□□ -1.69
CDKL3Q8IVW4 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.52□□□□□ -1.69
CDKL3Q8IVW4 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.52□□□□□ -1.69
CDKL3Q8IVW4 SNRPFP1-201ENST00000414761 252 ntBASIC4.52□□□□□ -1.69
CDKL3Q8IVW4 AC099336.2-201ENST00000422457 254 ntBASIC4.52□□□□□ -1.69
CDKL3Q8IVW4 DYNLL1P7-201ENST00000429273 258 ntBASIC4.52□□□□□ -1.69
CDKL3Q8IVW4 USP9YP9-201ENST00000429406 715 ntBASIC4.52□□□□□ -1.69
CDKL3Q8IVW4 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.52□□□□□ -1.69
CDKL3Q8IVW4 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.52□□□□□ -1.69
CDKL3Q8IVW4 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.52□□□□□ -1.69
CDKL3Q8IVW4 AC099560.2-201ENST00000457554 255 ntBASIC4.52□□□□□ -1.69
CDKL3Q8IVW4 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.52□□□□□ -1.69
CDKL3Q8IVW4 PPBPP1-201ENST00000510807 373 ntBASIC4.52□□□□□ -1.69
CDKL3Q8IVW4 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms