Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC109780.1-201ENST00000451768 1344 ntBASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 ADAM5-202ENST00000399789 1942 ntBASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 AC025125.1-201ENST00000624743 1922 ntBASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 METTL21EP-201ENST00000298105 713 ntBASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 MIR16-2-201ENST00000362117 81 ntBASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 ATP5F1P2-201ENST00000398143 760 ntBASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 RN7SKP114-201ENST00000410327 279 ntBASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 GAPDHP49-201ENST00000421421 961 ntBASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 CEACAMP1-201ENST00000434624 1035 ntBASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 AL158053.1-201ENST00000441503 453 ntBASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 AC073850.1-201ENST00000449243 255 ntBASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 RPS20P4-201ENST00000461659 355 ntBASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 SETP6-201ENST00000479329 568 ntBASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 OR5M14P-201ENST00000506803 618 ntBASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 SOX5P1-201ENST00000524155 1127 ntBASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 DYNLL1P4-201ENST00000549314 266 ntBASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 AP002799.1-201ENST00000623552 423 ntBASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.7□□□□□ -1.66
NUP54Q7Z3B4 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 SNURFL-201ENST00000309296 343 ntBASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 SNORA2.3-201ENST00000383920 135 ntBASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 RN7SKP97-201ENST00000410966 333 ntBASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 BMS1P13-201ENST00000417301 885 ntBASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 AC093162.1-201ENST00000419682 124 ntBASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 AC104333.2-201ENST00000422630 192 ntBASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 MTCO2P1-201ENST00000424648 477 ntBASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 AC091180.1-201ENST00000462104 372 ntBASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 AC090114.3-201ENST00000479267 829 ntBASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 HMGN2P25-201ENST00000486956 268 ntBASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 AC005412.2-201ENST00000492004 341 ntBASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 AC121161.1-201ENST00000510606 652 ntBASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 RNU6-334P-201ENST00000517072 102 ntBASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 C1DP5-201ENST00000525775 383 ntBASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 NMNAT1P1-201ENST00000554095 876 ntBASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 OR4U1P-201ENST00000554958 912 ntBASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 AC104229.1-201ENST00000561364 255 ntBASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 AL390726.5-202ENST00000564800 256 ntBASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 AC016180.1-201ENST00000567945 403 ntBASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC4.69□□□□□ -1.66
NUP54Q7Z3B4 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms