Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 AL139407.1-201ENST00000613826 1175 ntBASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 AC118658.2-201ENST00000618697 459 ntBASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 MIR6837-201ENST00000620884 64 ntBASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 AC104964.3-201ENST00000606115 2860 ntBASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC6.46□□□□□ -1.37
CCDC144BQ3MJ40 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
CCDC144BQ3MJ40 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.46□□□□□ -1.37
CCDC144BQ3MJ40 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
CCDC144BQ3MJ40 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 RNA5SP319-201ENST00000362768 119 ntBASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 NCSTNP1-201ENST00000406229 144 ntBASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 AL139421.1-201ENST00000423010 169 ntBASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 ATP5F1P1-201ENST00000433775 569 ntBASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 AC096775.1-201ENST00000437724 448 ntBASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 AC093155.1-201ENST00000440164 826 ntBASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 RPL7P59-201ENST00000447700 943 ntBASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 RN7SL197P-201ENST00000466981 299 ntBASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 COX6B1P2-201ENST00000489624 230 ntBASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 RPL7L1P13-201ENST00000511702 739 ntBASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 AP006245.2-201ENST00000522004 300 ntBASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 OR10G5P-201ENST00000532733 358 ntBASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 AC091515.1-201ENST00000548110 679 ntBASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 MRPS21P7-201ENST00000566937 238 ntBASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 AL512329.2-201ENST00000607350 548 ntBASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 AC007786.3-201ENST00000615154 596 ntBASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 MIR6133-201ENST00000617057 108 ntBASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 AC090017.1-201ENST00000548612 1779 ntBASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 DDX18P5-201ENST00000534547 1306 ntBASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 DCAF13P3-201ENST00000561147 1334 ntBASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CCDC144BQ3MJ40 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 U3.23-201ENST00000391132 200 ntBASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 AL161909.1-201ENST00000397390 712 ntBASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 AC019185.1-201ENST00000442718 389 ntBASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 MTND2P22-201ENST00000444325 1033 ntBASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 NDUFA5P9-201ENST00000472609 340 ntBASIC6.45□□□□□ -1.38
CCDC144BQ3MJ40 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms