Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
FOXF1Q12946 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.92□□□□□ -1.78
FOXF1Q12946 MTND4P26-201ENST00000415971 1359 ntBASIC3.91□□□□□ -1.78
FOXF1Q12946 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
FOXF1Q12946 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
FOXF1Q12946 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
FOXF1Q12946 OR4K17-201ENST00000315543 1032 ntBASIC3.91□□□□□ -1.78
FOXF1Q12946 AC067945.1-201ENST00000342609 618 ntBASIC3.91□□□□□ -1.78
FOXF1Q12946 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
FOXF1Q12946 HDGFP1-201ENST00000405943 252 ntBASIC3.91□□□□□ -1.78
FOXF1Q12946 RNU2-22P-201ENST00000411266 212 ntBASIC3.91□□□□□ -1.78
FOXF1Q12946 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.91□□□□□ -1.78
FOXF1Q12946 MFSD13B-201ENST00000420133 1290 ntBASIC3.91□□□□□ -1.78
FOXF1Q12946 AL592293.2-201ENST00000422292 996 ntBASIC3.91□□□□□ -1.78
FOXF1Q12946 EIF4EP1-201ENST00000422311 642 ntBASIC3.91□□□□□ -1.78
FOXF1Q12946 CEACAMP1-201ENST00000434624 1035 ntBASIC3.91□□□□□ -1.78
FOXF1Q12946 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.91□□□□□ -1.78
FOXF1Q12946 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.91□□□□□ -1.78
FOXF1Q12946 EIF2S2P2-201ENST00000447161 982 ntBASIC3.91□□□□□ -1.78
FOXF1Q12946 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.91□□□□□ -1.78
FOXF1Q12946 RPL7L1P1-201ENST00000448259 785 ntBASIC3.91□□□□□ -1.78
FOXF1Q12946 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC3.91□□□□□ -1.78
FOXF1Q12946 AC010469.1-201ENST00000463864 576 ntBASIC3.91□□□□□ -1.78
FOXF1Q12946 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.91□□□□□ -1.78
FOXF1Q12946 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
FOXF1Q12946 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.91□□□□□ -1.78
FOXF1Q12946 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.91□□□□□ -1.78
FOXF1Q12946 AC113430.1-201ENST00000506872 718 ntBASIC3.91□□□□□ -1.78
FOXF1Q12946 AC034205.1-201ENST00000520621 638 ntBASIC3.91□□□□□ -1.78
FOXF1Q12946 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.91□□□□□ -1.78
FOXF1Q12946 TRAV8-5-201ENST00000537369 341 ntBASIC3.91□□□□□ -1.78
FOXF1Q12946 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
FOXF1Q12946 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.91□□□□□ -1.78
FOXF1Q12946 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
FOXF1Q12946 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC3.91□□□□□ -1.78
FOXF1Q12946 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.91□□□□□ -1.78
FOXF1Q12946 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC3.91□□□□□ -1.78
FOXF1Q12946 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC3.91□□□□□ -1.78
FOXF1Q12946 AL008729.2-201ENST00000606393 473 ntBASIC3.91□□□□□ -1.78
FOXF1Q12946 AC015813.4-201ENST00000610469 179 ntBASIC3.91□□□□□ -1.78
FOXF1Q12946 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC3.91□□□□□ -1.78
FOXF1Q12946 AL445363.3-201ENST00000623080 671 ntBASIC3.91□□□□□ -1.78
FOXF1Q12946 AC010435.1-201ENST00000623353 1177 ntBASIC3.91□□□□□ -1.78
FOXF1Q12946 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
FOXF1Q12946 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC3.91□□□□□ -1.78
FOXF1Q12946 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC3.91□□□□□ -1.78
FOXF1Q12946 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
FOXF1Q12946 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
FOXF1Q12946 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.9□□□□□ -1.78
FOXF1Q12946 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
FOXF1Q12946 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
FOXF1Q12946 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
FOXF1Q12946 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
FOXF1Q12946 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
FOXF1Q12946 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC3.9□□□□□ -1.79
FOXF1Q12946 SNORD66.1-201ENST00000391230 76 ntBASIC3.9□□□□□ -1.79
FOXF1Q12946 RN7SKP216-201ENST00000411050 312 ntBASIC3.9□□□□□ -1.79
FOXF1Q12946 AC016397.1-201ENST00000412463 242 ntBASIC3.9□□□□□ -1.79
FOXF1Q12946 AL356968.2-201ENST00000412769 1257 ntBASIC3.9□□□□□ -1.79
FOXF1Q12946 FAR2P2-201ENST00000413041 594 ntBASIC3.9□□□□□ -1.79
FOXF1Q12946 NRBF2P2-201ENST00000413087 861 ntBASIC3.9□□□□□ -1.79
FOXF1Q12946 FAR2P4-202ENST00000425399 584 ntBASIC3.9□□□□□ -1.79
FOXF1Q12946 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
FOXF1Q12946 AC073335.1-201ENST00000427776 363 ntBASIC3.9□□□□□ -1.79
FOXF1Q12946 AC023141.6-201ENST00000429418 337 ntBASIC3.9□□□□□ -1.79
FOXF1Q12946 AL132765.1-201ENST00000434165 553 ntBASIC3.9□□□□□ -1.79
FOXF1Q12946 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.9□□□□□ -1.79
FOXF1Q12946 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.9□□□□□ -1.79
FOXF1Q12946 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC3.9□□□□□ -1.79
FOXF1Q12946 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
FOXF1Q12946 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.9□□□□□ -1.79
FOXF1Q12946 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC3.9□□□□□ -1.79
FOXF1Q12946 AC008694.2-201ENST00000517591 306 ntBASIC3.9□□□□□ -1.79
FOXF1Q12946 AP001804.2-201ENST00000533932 910 ntBASIC3.9□□□□□ -1.79
FOXF1Q12946 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC3.9□□□□□ -1.79
FOXF1Q12946 AC084759.1-201ENST00000561168 290 ntBASIC3.9□□□□□ -1.79
FOXF1Q12946 MIR4284-201ENST00000578924 81 ntBASIC3.9□□□□□ -1.79
FOXF1Q12946 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.9□□□□□ -1.79
FOXF1Q12946 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.9□□□□□ -1.79
FOXF1Q12946 AC074140.1-201ENST00000621617 208 ntBASIC3.9□□□□□ -1.79
FOXF1Q12946 IPO5-229ENST00000631030 192 ntTSL 5 BASIC3.9□□□□□ -1.79
FOXF1Q12946 AL139254.3-201ENST00000641097 674 ntBASIC3.9□□□□□ -1.79
FOXF1Q12946 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.9□□□□□ -1.79
FOXF1Q12946 AL158163.1-201ENST00000603915 1649 ntBASIC3.9□□□□□ -1.79
FOXF1Q12946 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.9□□□□□ -1.79
FOXF1Q12946 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
FOXF1Q12946 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
FOXF1Q12946 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
FOXF1Q12946 THAP12P8-201ENST00000447914 2115 ntBASIC3.89□□□□□ -1.79
FOXF1Q12946 HCFC2P1-201ENST00000392864 1592 ntBASIC3.89□□□□□ -1.79
FOXF1Q12946 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
FOXF1Q12946 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
FOXF1Q12946 DDX18P6-201ENST00000450119 1997 ntBASIC3.89□□□□□ -1.79
FOXF1Q12946 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
FOXF1Q12946 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
FOXF1Q12946 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.89□□□□□ -1.79
FOXF1Q12946 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
FOXF1Q12946 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
FOXF1Q12946 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
FOXF1Q12946 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms