Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 CIR1P2-201ENST00000514821 1342 ntBASIC3.47□□□□□ -1.85
HIST1H1AQ02539 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HIST1H1AQ02539 AC108467.2-201ENST00000617640 1597 ntBASIC3.47□□□□□ -1.85
HIST1H1AQ02539 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HIST1H1AQ02539 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
HIST1H1AQ02539 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
HIST1H1AQ02539 RNA5SP191-201ENST00000362585 102 ntBASIC3.47□□□□□ -1.85
HIST1H1AQ02539 SNORA71.2-201ENST00000364941 134 ntBASIC3.47□□□□□ -1.85
HIST1H1AQ02539 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC3.47□□□□□ -1.85
HIST1H1AQ02539 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HIST1H1AQ02539 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.47□□□□□ -1.85
HIST1H1AQ02539 ZNF603P-201ENST00000405613 487 ntBASIC3.47□□□□□ -1.85
HIST1H1AQ02539 AMD1P2-201ENST00000412936 992 ntBASIC3.47□□□□□ -1.85
HIST1H1AQ02539 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC3.47□□□□□ -1.85
HIST1H1AQ02539 AL645608.4-201ENST00000423619 154 ntBASIC3.47□□□□□ -1.85
HIST1H1AQ02539 AC093698.1-201ENST00000423843 571 ntBASIC3.47□□□□□ -1.85
HIST1H1AQ02539 RPL21P91-201ENST00000429231 479 ntBASIC3.47□□□□□ -1.85
HIST1H1AQ02539 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC3.47□□□□□ -1.85
HIST1H1AQ02539 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC3.47□□□□□ -1.85
HIST1H1AQ02539 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC3.47□□□□□ -1.85
HIST1H1AQ02539 HMGB1P16-201ENST00000447155 540 ntBASIC3.47□□□□□ -1.85
HIST1H1AQ02539 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC3.47□□□□□ -1.85
HIST1H1AQ02539 OR2AF1P-201ENST00000454899 889 ntBASIC3.47□□□□□ -1.85
HIST1H1AQ02539 AC063943.1-201ENST00000465434 453 ntBASIC3.47□□□□□ -1.85
HIST1H1AQ02539 RN7SL808P-201ENST00000496066 299 ntBASIC3.47□□□□□ -1.85
HIST1H1AQ02539 OR5M14P-201ENST00000506803 618 ntBASIC3.47□□□□□ -1.85
HIST1H1AQ02539 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC3.47□□□□□ -1.85
HIST1H1AQ02539 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.47□□□□□ -1.85
HIST1H1AQ02539 ATG10-208ENST00000513634 618 ntTSL 2 BASIC3.47□□□□□ -1.85
HIST1H1AQ02539 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.47□□□□□ -1.85
HIST1H1AQ02539 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC3.47□□□□□ -1.85
HIST1H1AQ02539 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC3.47□□□□□ -1.85
HIST1H1AQ02539 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.47□□□□□ -1.85
HIST1H1AQ02539 AC008033.2-201ENST00000542626 177 ntBASIC3.47□□□□□ -1.85
HIST1H1AQ02539 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC3.47□□□□□ -1.85
HIST1H1AQ02539 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC3.47□□□□□ -1.85
HIST1H1AQ02539 AC107016.1-201ENST00000550463 337 ntBASIC3.47□□□□□ -1.85
HIST1H1AQ02539 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC3.47□□□□□ -1.85
HIST1H1AQ02539 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC3.47□□□□□ -1.85
HIST1H1AQ02539 RN7SL652P-201ENST00000577769 300 ntBASIC3.47□□□□□ -1.85
HIST1H1AQ02539 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC3.47□□□□□ -1.85
HIST1H1AQ02539 AC110741.2-201ENST00000605278 268 ntBASIC3.47□□□□□ -1.85
HIST1H1AQ02539 AL391358.1-201ENST00000605342 190 ntBASIC3.47□□□□□ -1.85
HIST1H1AQ02539 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HIST1H1AQ02539 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HIST1H1AQ02539 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
HIST1H1AQ02539 AC114546.3-201ENST00000623582 1734 ntBASIC3.47□□□□□ -1.85
HIST1H1AQ02539 AC097504.1-201ENST00000515103 2415 ntBASIC3.46□□□□□ -1.85
HIST1H1AQ02539 AC109780.1-201ENST00000451768 1344 ntBASIC3.46□□□□□ -1.85
HIST1H1AQ02539 AL627171.1-201ENST00000618845 1308 ntBASIC3.46□□□□□ -1.85
HIST1H1AQ02539 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HIST1H1AQ02539 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.46□□□□□ -1.86
HIST1H1AQ02539 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.46□□□□□ -1.86
HIST1H1AQ02539 AL391684.1-202ENST00000641293 1636 ntBASIC3.46□□□□□ -1.86
HIST1H1AQ02539 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HIST1H1AQ02539 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HIST1H1AQ02539 RN7SKP269-201ENST00000365545 319 ntBASIC3.46□□□□□ -1.86
HIST1H1AQ02539 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
HIST1H1AQ02539 MIR1178-201ENST00000408396 91 ntBASIC3.46□□□□□ -1.86
HIST1H1AQ02539 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.46□□□□□ -1.86
HIST1H1AQ02539 AC019050.1-201ENST00000418508 492 ntBASIC3.46□□□□□ -1.86
HIST1H1AQ02539 UBTFL3-201ENST00000418934 1024 ntBASIC3.46□□□□□ -1.86
HIST1H1AQ02539 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HIST1H1AQ02539 AC007559.1-201ENST00000428736 355 ntBASIC3.46□□□□□ -1.86
HIST1H1AQ02539 NRBF2P3-201ENST00000432731 865 ntBASIC3.46□□□□□ -1.86
HIST1H1AQ02539 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC3.46□□□□□ -1.86
HIST1H1AQ02539 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.46□□□□□ -1.86
HIST1H1AQ02539 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HIST1H1AQ02539 RPSAP41-201ENST00000439695 860 ntBASIC3.46□□□□□ -1.86
HIST1H1AQ02539 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.46□□□□□ -1.86
HIST1H1AQ02539 CASP3P1-201ENST00000446037 609 ntBASIC3.46□□□□□ -1.86
HIST1H1AQ02539 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC3.46□□□□□ -1.86
HIST1H1AQ02539 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC3.46□□□□□ -1.86
HIST1H1AQ02539 AC110749.1-201ENST00000462007 357 ntBASIC3.46□□□□□ -1.86
HIST1H1AQ02539 AC104763.1-201ENST00000475274 360 ntBASIC3.46□□□□□ -1.86
HIST1H1AQ02539 UBTFL6-201ENST00000477929 1024 ntBASIC3.46□□□□□ -1.86
HIST1H1AQ02539 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC3.46□□□□□ -1.86
HIST1H1AQ02539 AC110775.1-201ENST00000513721 462 ntBASIC3.46□□□□□ -1.86
HIST1H1AQ02539 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.46□□□□□ -1.86
HIST1H1AQ02539 RNA5SP446-201ENST00000515955 82 ntBASIC3.46□□□□□ -1.86
HIST1H1AQ02539 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
HIST1H1AQ02539 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC3.46□□□□□ -1.86
HIST1H1AQ02539 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC3.46□□□□□ -1.86
HIST1H1AQ02539 CBX3P5-201ENST00000552017 521 ntBASIC3.46□□□□□ -1.86
HIST1H1AQ02539 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC3.46□□□□□ -1.86
HIST1H1AQ02539 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC3.46□□□□□ -1.86
HIST1H1AQ02539 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.46□□□□□ -1.86
HIST1H1AQ02539 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
HIST1H1AQ02539 BGLT3-201ENST00000564523 994 ntBASIC3.46□□□□□ -1.86
HIST1H1AQ02539 MIR3667-201ENST00000581025 74 ntBASIC3.46□□□□□ -1.86
HIST1H1AQ02539 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.46□□□□□ -1.86
HIST1H1AQ02539 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.46□□□□□ -1.86
HIST1H1AQ02539 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC3.46□□□□□ -1.86
HIST1H1AQ02539 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC3.46□□□□□ -1.86
HIST1H1AQ02539 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC3.46□□□□□ -1.86
HIST1H1AQ02539 AL445222.1-201ENST00000607259 628 ntBASIC3.46□□□□□ -1.86
HIST1H1AQ02539 uc_338.32-201ENST00000615087 172 ntBASIC3.46□□□□□ -1.86
HIST1H1AQ02539 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC3.46□□□□□ -1.86
HIST1H1AQ02539 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
HIST1H1AQ02539 AC091905.2-201ENST00000623143 306 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms