Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 NACA3P-201ENST00000359690 648 ntBASIC2.57□□□□□ -2
HSPG2P98160 AC021660.1-201ENST00000465006 554 ntBASIC2.57□□□□□ -2
HSPG2P98160 AC007458.1-201ENST00000542812 373 ntBASIC2.57□□□□□ -2
HSPG2P98160 AC015914.2-201ENST00000618167 288 ntBASIC2.57□□□□□ -2
HSPG2P98160 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
HSPG2P98160 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC2.57□□□□□ -2
HSPG2P98160 MR1-209ENST00000617803 7584 ntTSL 5 BASIC2.57□□□□□ -2
HSPG2P98160 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
HSPG2P98160 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
HSPG2P98160 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.57□□□□□ -2
HSPG2P98160 AC009779.8-201ENST00000641684 4384 ntBASIC2.57□□□□□ -2
HSPG2P98160 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC2.57□□□□□ -2
HSPG2P98160 AL672167.1-205ENST00000641112 3080 ntBASIC2.57□□□□□ -2
HSPG2P98160 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
HSPG2P98160 AC012671.1-201ENST00000451912 203 ntBASIC2.57□□□□□ -2
HSPG2P98160 OR52E3P-201ENST00000452083 936 ntBASIC2.57□□□□□ -2
HSPG2P98160 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC2.57□□□□□ -2
HSPG2P98160 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC2.57□□□□□ -2
HSPG2P98160 AL031666.3-201ENST00000609320 1006 ntBASIC2.57□□□□□ -2
HSPG2P98160 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.57□□□□□ -2
HSPG2P98160 AC079684.1-201ENST00000621405 437 ntBASIC2.57□□□□□ -2
HSPG2P98160 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
HSPG2P98160 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
HSPG2P98160 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.57□□□□□ -2
HSPG2P98160 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
HSPG2P98160 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC2.57□□□□□ -2
HSPG2P98160 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
HSPG2P98160 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
HSPG2P98160 SOD2P1-201ENST00000396543 562 ntBASIC2.56□□□□□ -2
HSPG2P98160 AC013429.2-201ENST00000418798 781 ntBASIC2.56□□□□□ -2
HSPG2P98160 AL035423.1-201ENST00000420331 213 ntBASIC2.56□□□□□ -2
HSPG2P98160 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.56□□□□□ -2
HSPG2P98160 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC2.56□□□□□ -2
HSPG2P98160 RN7SL601P-201ENST00000471221 293 ntBASIC2.56□□□□□ -2
HSPG2P98160 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
HSPG2P98160 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC2.56□□□□□ -2
HSPG2P98160 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.56□□□□□ -2
HSPG2P98160 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC2.56□□□□□ -2
HSPG2P98160 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC2.56□□□□□ -2
HSPG2P98160 AC012493.2-201ENST00000595083 291 ntBASIC2.56□□□□□ -2
HSPG2P98160 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
HSPG2P98160 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
HSPG2P98160 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC2.56□□□□□ -2
HSPG2P98160 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
HSPG2P98160 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC2.56□□□□□ -2
HSPG2P98160 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC2.56□□□□□ -2
HSPG2P98160 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
HSPG2P98160 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
HSPG2P98160 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
HSPG2P98160 RNU1-33P-201ENST00000364249 162 ntBASIC2.56□□□□□ -2
HSPG2P98160 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC2.56□□□□□ -2
HSPG2P98160 RPS7P15-201ENST00000415804 584 ntBASIC2.56□□□□□ -2
HSPG2P98160 AC092162.1-201ENST00000432828 434 ntBASIC2.56□□□□□ -2
HSPG2P98160 RPS11P1-201ENST00000451072 473 ntBASIC2.56□□□□□ -2
HSPG2P98160 CYCSP53-201ENST00000455540 265 ntBASIC2.56□□□□□ -2
HSPG2P98160 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC2.56□□□□□ -2
HSPG2P98160 RN7SL197P-201ENST00000466981 299 ntBASIC2.56□□□□□ -2
HSPG2P98160 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC2.56□□□□□ -2
HSPG2P98160 GNRHR2P1-201ENST00000555315 631 ntBASIC2.56□□□□□ -2
HSPG2P98160 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.56□□□□□ -2
HSPG2P98160 CSNK1A1P1-202ENST00000563423 981 ntBASIC2.56□□□□□ -2
HSPG2P98160 AC021242.1-201ENST00000507315 2035 ntBASIC2.56□□□□□ -2
HSPG2P98160 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
HSPG2P98160 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC2.56□□□□□ -2
HSPG2P98160 EOGT-210ENST00000615922 1931 ntBASIC2.56□□□□□ -2
HSPG2P98160 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
HSPG2P98160 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
HSPG2P98160 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC2.56□□□□□ -2
HSPG2P98160 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC2.56□□□□□ -2
HSPG2P98160 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC2.56□□□□□ -2
HSPG2P98160 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
HSPG2P98160 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC2.56□□□□□ -2
HSPG2P98160 AC005300.1-201ENST00000428401 373 ntBASIC2.56□□□□□ -2
HSPG2P98160 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC2.56□□□□□ -2
HSPG2P98160 AC090686.1-201ENST00000481577 749 ntBASIC2.56□□□□□ -2
HSPG2P98160 HPRT1P2-201ENST00000505250 544 ntBASIC2.56□□□□□ -2
HSPG2P98160 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC2.56□□□□□ -2
HSPG2P98160 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC2.56□□□□□ -2
HSPG2P98160 AC114878.2-201ENST00000604863 1251 ntBASIC2.56□□□□□ -2
HSPG2P98160 Z95327.3-201ENST00000610385 572 ntBASIC2.56□□□□□ -2
HSPG2P98160 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC2.56□□□□□ -2
HSPG2P98160 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
HSPG2P98160 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
HSPG2P98160 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC2.56□□□□□ -2
HSPG2P98160 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC2.56□□□□□ -2
HSPG2P98160 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
HSPG2P98160 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
HSPG2P98160 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
HSPG2P98160 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
HSPG2P98160 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
HSPG2P98160 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC2.56□□□□□ -2
HSPG2P98160 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
HSPG2P98160 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
HSPG2P98160 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC2.56□□□□□ -2
HSPG2P98160 HSPD1P21-201ENST00000436541 245 ntBASIC2.56□□□□□ -2
HSPG2P98160 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC2.56□□□□□ -2
HSPG2P98160 BTF3P6-201ENST00000448054 499 ntBASIC2.56□□□□□ -2
HSPG2P98160 PDSS1P2-201ENST00000449397 678 ntBASIC2.56□□□□□ -2
HSPG2P98160 MRPL35P4-201ENST00000453682 566 ntBASIC2.56□□□□□ -2
HSPG2P98160 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms