Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC3.98□□□□□ -1.77
LSM6P62312 AC055839.1-201ENST00000634467 498 ntBASIC3.98□□□□□ -1.77
LSM6P62312 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.98□□□□□ -1.77
LSM6P62312 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LSM6P62312 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LSM6P62312 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC3.98□□□□□ -1.77
LSM6P62312 AL133412.1-201ENST00000380194 2992 ntBASIC3.98□□□□□ -1.77
LSM6P62312 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LSM6P62312 AC139769.1-204ENST00000472297 1931 ntBASIC3.97□□□□□ -1.77
LSM6P62312 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.97□□□□□ -1.77
LSM6P62312 AC009951.1-201ENST00000623674 2614 ntBASIC3.97□□□□□ -1.77
LSM6P62312 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
LSM6P62312 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LSM6P62312 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LSM6P62312 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LSM6P62312 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.97□□□□□ -1.77
LSM6P62312 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LSM6P62312 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.97□□□□□ -1.77
LSM6P62312 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC3.97□□□□□ -1.77
LSM6P62312 RNU4-7P-201ENST00000364758 141 ntBASIC3.97□□□□□ -1.77
LSM6P62312 RNA5SP22-201ENST00000365393 109 ntBASIC3.97□□□□□ -1.77
LSM6P62312 RNU1-63P-201ENST00000383902 164 ntBASIC3.97□□□□□ -1.77
LSM6P62312 RNU1-44P-201ENST00000384453 163 ntBASIC3.97□□□□□ -1.77
LSM6P62312 AL078604.1-201ENST00000404609 466 ntBASIC3.97□□□□□ -1.77
LSM6P62312 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.97□□□□□ -1.77
LSM6P62312 USP9YP9-201ENST00000429406 715 ntBASIC3.97□□□□□ -1.77
LSM6P62312 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LSM6P62312 AC092013.1-201ENST00000438795 332 ntBASIC3.97□□□□□ -1.77
LSM6P62312 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LSM6P62312 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LSM6P62312 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.97□□□□□ -1.77
LSM6P62312 AC010326.1-201ENST00000462726 602 ntBASIC3.97□□□□□ -1.77
LSM6P62312 AC090013.1-201ENST00000485147 480 ntBASIC3.97□□□□□ -1.77
LSM6P62312 AC083982.1-201ENST00000485679 344 ntBASIC3.97□□□□□ -1.77
LSM6P62312 RPL32P9-201ENST00000487963 407 ntBASIC3.97□□□□□ -1.77
LSM6P62312 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
LSM6P62312 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.97□□□□□ -1.77
LSM6P62312 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC3.97□□□□□ -1.77
LSM6P62312 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC3.97□□□□□ -1.77
LSM6P62312 OR7H2P-201ENST00000513483 306 ntBASIC3.97□□□□□ -1.77
LSM6P62312 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.97□□□□□ -1.77
LSM6P62312 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.97□□□□□ -1.77
LSM6P62312 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.97□□□□□ -1.77
LSM6P62312 OR5M2P-201ENST00000529003 936 ntBASIC3.97□□□□□ -1.77
LSM6P62312 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.97□□□□□ -1.77
LSM6P62312 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC3.97□□□□□ -1.77
LSM6P62312 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.97□□□□□ -1.77
LSM6P62312 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC3.97□□□□□ -1.77
LSM6P62312 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LSM6P62312 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.97□□□□□ -1.77
LSM6P62312 FAM25E-202ENST00000608562 189 ntBASIC3.97□□□□□ -1.77
LSM6P62312 AL049539.1-201ENST00000611964 459 ntBASIC3.97□□□□□ -1.77
LSM6P62312 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LSM6P62312 AL353726.1-201ENST00000614041 1000 ntBASIC3.97□□□□□ -1.77
LSM6P62312 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.97□□□□□ -1.77
LSM6P62312 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.97□□□□□ -1.77
LSM6P62312 AC067852.7-201ENST00000623270 535 ntBASIC3.97□□□□□ -1.77
LSM6P62312 AL356121.2-201ENST00000624715 780 ntBASIC3.97□□□□□ -1.77
LSM6P62312 LINC01808-202ENST00000641680 1116 ntBASIC3.97□□□□□ -1.77
LSM6P62312 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LSM6P62312 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LSM6P62312 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC3.97□□□□□ -1.77
LSM6P62312 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC3.97□□□□□ -1.77
LSM6P62312 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.97□□□□□ -1.77
LSM6P62312 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
LSM6P62312 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.97□□□□□ -1.77
LSM6P62312 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LSM6P62312 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.77
LSM6P62312 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.77
LSM6P62312 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
LSM6P62312 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
LSM6P62312 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
LSM6P62312 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
LSM6P62312 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
LSM6P62312 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
LSM6P62312 RNA5SP307-201ENST00000362863 116 ntBASIC3.96□□□□□ -1.78
LSM6P62312 RNU6-1279P-201ENST00000383917 103 ntBASIC3.96□□□□□ -1.78
LSM6P62312 AL133270.1-201ENST00000402635 279 ntBASIC3.96□□□□□ -1.78
LSM6P62312 AL049697.2-201ENST00000403708 294 ntBASIC3.96□□□□□ -1.78
LSM6P62312 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LSM6P62312 RAB9AP4-201ENST00000415230 609 ntBASIC3.96□□□□□ -1.78
LSM6P62312 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.96□□□□□ -1.78
LSM6P62312 PDSS1P1-201ENST00000422953 1114 ntBASIC3.96□□□□□ -1.78
LSM6P62312 AL590762.4-201ENST00000425885 253 ntBASIC3.96□□□□□ -1.78
LSM6P62312 RPS12P10-201ENST00000427031 377 ntBASIC3.96□□□□□ -1.78
LSM6P62312 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC3.96□□□□□ -1.78
LSM6P62312 ELOCP10-201ENST00000440624 327 ntBASIC3.96□□□□□ -1.78
LSM6P62312 RPL23AP93-201ENST00000440847 484 ntBASIC3.96□□□□□ -1.78
LSM6P62312 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.96□□□□□ -1.78
LSM6P62312 DDX39BP2-208ENST00000453923 258 ntBASIC3.96□□□□□ -1.78
LSM6P62312 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.96□□□□□ -1.78
LSM6P62312 RN7SL826P-201ENST00000479724 288 ntBASIC3.96□□□□□ -1.78
LSM6P62312 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LSM6P62312 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.96□□□□□ -1.78
LSM6P62312 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.96□□□□□ -1.78
LSM6P62312 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.96□□□□□ -1.78
LSM6P62312 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC3.96□□□□□ -1.78
LSM6P62312 AP000827.1-201ENST00000527814 258 ntBASIC3.96□□□□□ -1.78
LSM6P62312 DEFB109D-201ENST00000529497 240 ntBASIC3.96□□□□□ -1.78
LSM6P62312 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 157.2 ms