Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 BUD31P1-201ENST00000521828 359 ntBASIC4.03□□□□□ -1.76
LMO4P61968 AC100784.1-201ENST00000522790 310 ntBASIC4.03□□□□□ -1.76
LMO4P61968 MTATP6P15-201ENST00000527233 835 ntBASIC4.03□□□□□ -1.76
LMO4P61968 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LMO4P61968 GLRXP2-201ENST00000555594 321 ntBASIC4.03□□□□□ -1.76
LMO4P61968 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.03□□□□□ -1.76
LMO4P61968 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.03□□□□□ -1.76
LMO4P61968 AC116553.2-201ENST00000564203 463 ntBASIC4.03□□□□□ -1.76
LMO4P61968 AC090666.1-201ENST00000578241 445 ntBASIC4.03□□□□□ -1.76
LMO4P61968 AC022726.1-201ENST00000587475 207 ntBASIC4.03□□□□□ -1.76
LMO4P61968 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
LMO4P61968 AC022022.2-201ENST00000602989 360 ntBASIC4.03□□□□□ -1.76
LMO4P61968 AC023813.4-201ENST00000607580 580 ntBASIC4.03□□□□□ -1.76
LMO4P61968 AC112503.1-201ENST00000608436 391 ntBASIC4.03□□□□□ -1.76
LMO4P61968 FAM27B-201ENST00000610601 213 ntBASIC4.03□□□□□ -1.76
LMO4P61968 MIR8084-201ENST00000614105 89 ntBASIC4.03□□□□□ -1.76
LMO4P61968 RNA5SP439-201ENST00000617595 124 ntBASIC4.03□□□□□ -1.76
LMO4P61968 AL022401.1-201ENST00000619498 108 ntBASIC4.03□□□□□ -1.76
LMO4P61968 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.03□□□□□ -1.76
LMO4P61968 MIR6810-201ENST00000622701 70 ntBASIC4.03□□□□□ -1.76
LMO4P61968 AP002791.1-201ENST00000623291 381 ntBASIC4.03□□□□□ -1.76
LMO4P61968 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LMO4P61968 AC068620.4-201ENST00000636730 1182 ntBASIC4.03□□□□□ -1.76
LMO4P61968 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LMO4P61968 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LMO4P61968 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
LMO4P61968 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.03□□□□□ -1.76
LMO4P61968 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LMO4P61968 CASC19-284ENST00000642142 1868 ntBASIC4.03□□□□□ -1.77
LMO4P61968 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.77
LMO4P61968 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
LMO4P61968 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LMO4P61968 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LMO4P61968 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC4.02□□□□□ -1.77
LMO4P61968 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
LMO4P61968 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LMO4P61968 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LMO4P61968 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LMO4P61968 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
LMO4P61968 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
LMO4P61968 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LMO4P61968 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
LMO4P61968 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
LMO4P61968 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LMO4P61968 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.02□□□□□ -1.77
LMO4P61968 RPL22P22-201ENST00000395439 379 ntBASIC4.02□□□□□ -1.77
LMO4P61968 GLULP6-201ENST00000399502 913 ntBASIC4.02□□□□□ -1.77
LMO4P61968 AC136624.1-201ENST00000400791 413 ntBASIC4.02□□□□□ -1.77
LMO4P61968 NPM1P37-201ENST00000403105 874 ntBASIC4.02□□□□□ -1.77
LMO4P61968 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.02□□□□□ -1.77
LMO4P61968 HIGD1AP15-201ENST00000416198 280 ntBASIC4.02□□□□□ -1.77
LMO4P61968 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4.02□□□□□ -1.77
LMO4P61968 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.02□□□□□ -1.77
LMO4P61968 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.02□□□□□ -1.77
LMO4P61968 MTCO2P21-201ENST00000419780 677 ntBASIC4.02□□□□□ -1.77
LMO4P61968 TCEA1P2-201ENST00000420496 906 ntBASIC4.02□□□□□ -1.77
LMO4P61968 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC4.02□□□□□ -1.77
LMO4P61968 RPS26P4-201ENST00000431743 355 ntBASIC4.02□□□□□ -1.77
LMO4P61968 ZNF965P-201ENST00000432501 817 ntBASIC4.02□□□□□ -1.77
LMO4P61968 AP000936.3-201ENST00000438127 255 ntBASIC4.02□□□□□ -1.77
LMO4P61968 AC073052.1-201ENST00000440417 714 ntBASIC4.02□□□□□ -1.77
LMO4P61968 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.02□□□□□ -1.77
LMO4P61968 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.02□□□□□ -1.77
LMO4P61968 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC4.02□□□□□ -1.77
LMO4P61968 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.02□□□□□ -1.77
LMO4P61968 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.02□□□□□ -1.77
LMO4P61968 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.02□□□□□ -1.77
LMO4P61968 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
LMO4P61968 RN7SL481P-201ENST00000477764 299 ntBASIC4.02□□□□□ -1.77
LMO4P61968 AC093663.2-201ENST00000484625 313 ntBASIC4.02□□□□□ -1.77
LMO4P61968 OR9N1P-202ENST00000494289 481 ntBASIC4.02□□□□□ -1.77
LMO4P61968 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC4.02□□□□□ -1.77
LMO4P61968 NIFKP7-201ENST00000503365 834 ntBASIC4.02□□□□□ -1.77
LMO4P61968 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.02□□□□□ -1.77
LMO4P61968 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.02□□□□□ -1.77
LMO4P61968 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LMO4P61968 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LMO4P61968 AC097486.1-201ENST00000515331 210 ntBASIC4.02□□□□□ -1.77
LMO4P61968 AC103833.1-201ENST00000517442 172 ntBASIC4.02□□□□□ -1.77
LMO4P61968 RAB9BP1-201ENST00000519581 626 ntBASIC4.02□□□□□ -1.77
LMO4P61968 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.02□□□□□ -1.77
LMO4P61968 UBTFL10-201ENST00000528532 562 ntBASIC4.02□□□□□ -1.77
LMO4P61968 AP003066.2-201ENST00000529375 555 ntBASIC4.02□□□□□ -1.77
LMO4P61968 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.02□□□□□ -1.77
LMO4P61968 AL049839.1-201ENST00000556151 657 ntBASIC4.02□□□□□ -1.77
LMO4P61968 AC040958.1-201ENST00000561102 201 ntBASIC4.02□□□□□ -1.77
LMO4P61968 AL109741.3-201ENST00000561748 592 ntBASIC4.02□□□□□ -1.77
LMO4P61968 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.02□□□□□ -1.77
LMO4P61968 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.02□□□□□ -1.77
LMO4P61968 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.02□□□□□ -1.77
LMO4P61968 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.02□□□□□ -1.77
LMO4P61968 RN7SL690P-201ENST00000582087 240 ntBASIC4.02□□□□□ -1.77
LMO4P61968 AC209154.1-201ENST00000582156 337 ntBASIC4.02□□□□□ -1.77
LMO4P61968 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.02□□□□□ -1.77
LMO4P61968 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LMO4P61968 AC068790.4-201ENST00000602474 263 ntBASIC4.02□□□□□ -1.77
LMO4P61968 AL121932.1-201ENST00000605542 214 ntBASIC4.02□□□□□ -1.77
LMO4P61968 CYCSP41-201ENST00000616920 296 ntBASIC4.02□□□□□ -1.77
LMO4P61968 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
LMO4P61968 AC010928.1-201ENST00000592477 1447 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms