Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CLDN6P56747 ATP5F1P2-201ENST00000398143 760 ntBASIC4.39□□□□□ -1.71
CLDN6P56747 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.39□□□□□ -1.71
CLDN6P56747 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.39□□□□□ -1.71
CLDN6P56747 AC011998.1-201ENST00000433403 117 ntBASIC4.39□□□□□ -1.71
CLDN6P56747 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.39□□□□□ -1.71
CLDN6P56747 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.39□□□□□ -1.71
CLDN6P56747 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.39□□□□□ -1.71
CLDN6P56747 RN7SL98P-201ENST00000462271 300 ntBASIC4.39□□□□□ -1.71
CLDN6P56747 RN7SL542P-201ENST00000467147 294 ntBASIC4.39□□□□□ -1.71
CLDN6P56747 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.39□□□□□ -1.71
CLDN6P56747 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.39□□□□□ -1.71
CLDN6P56747 AC005868.1-201ENST00000536421 331 ntBASIC4.39□□□□□ -1.71
CLDN6P56747 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.39□□□□□ -1.71
CLDN6P56747 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.39□□□□□ -1.71
CLDN6P56747 GLRXP2-201ENST00000555594 321 ntBASIC4.39□□□□□ -1.71
CLDN6P56747 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.39□□□□□ -1.71
CLDN6P56747 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.39□□□□□ -1.71
CLDN6P56747 AC084759.1-201ENST00000561168 290 ntBASIC4.39□□□□□ -1.71
CLDN6P56747 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.39□□□□□ -1.71
CLDN6P56747 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.39□□□□□ -1.71
CLDN6P56747 AL356863.1-201ENST00000623378 1080 ntBASIC4.39□□□□□ -1.71
CLDN6P56747 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.39□□□□□ -1.71
CLDN6P56747 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLDN6P56747 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.39□□□□□ -1.71
CLDN6P56747 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CLDN6P56747 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.39□□□□□ -1.71
CLDN6P56747 AC104260.2-201ENST00000623551 3497 ntBASIC4.39□□□□□ -1.71
CLDN6P56747 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CLDN6P56747 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CLDN6P56747 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.39□□□□□ -1.71
CLDN6P56747 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.39□□□□□ -1.71
CLDN6P56747 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLDN6P56747 AC005261.4-201ENST00000600047 1385 ntBASIC4.39□□□□□ -1.71
CLDN6P56747 SALL4P2-201ENST00000423288 2910 ntBASIC4.39□□□□□ -1.71
CLDN6P56747 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLDN6P56747 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.38□□□□□ -1.71
CLDN6P56747 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLDN6P56747 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CLDN6P56747 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.38□□□□□ -1.71
CLDN6P56747 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.38□□□□□ -1.71
CLDN6P56747 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLDN6P56747 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLDN6P56747 RNA5SP283-201ENST00000365604 119 ntBASIC4.38□□□□□ -1.71
CLDN6P56747 MT-RNR1-201ENST00000389680 954 ntBASIC4.38□□□□□ -1.71
CLDN6P56747 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.38□□□□□ -1.71
CLDN6P56747 LINC01881-201ENST00000416103 412 ntBASIC4.38□□□□□ -1.71
CLDN6P56747 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.38□□□□□ -1.71
CLDN6P56747 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLDN6P56747 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.38□□□□□ -1.71
CLDN6P56747 ACTR3P2-201ENST00000439585 1257 ntBASIC4.38□□□□□ -1.71
CLDN6P56747 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLDN6P56747 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.38□□□□□ -1.71
CLDN6P56747 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.38□□□□□ -1.71
CLDN6P56747 AL591623.2-201ENST00000449978 222 ntBASIC4.38□□□□□ -1.71
CLDN6P56747 AL133244.1-201ENST00000456007 258 ntBASIC4.38□□□□□ -1.71
CLDN6P56747 SCARNA10-201ENST00000459255 330 ntBASIC4.38□□□□□ -1.71
CLDN6P56747 RPS7P7-201ENST00000463499 571 ntBASIC4.38□□□□□ -1.71
CLDN6P56747 AC090142.1-201ENST00000465776 462 ntBASIC4.38□□□□□ -1.71
CLDN6P56747 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.38□□□□□ -1.71
CLDN6P56747 RN7SL810P-201ENST00000493031 276 ntBASIC4.38□□□□□ -1.71
CLDN6P56747 AC108475.1-201ENST00000507880 950 ntBASIC4.38□□□□□ -1.71
CLDN6P56747 RNU1-45P-201ENST00000517191 141 ntBASIC4.38□□□□□ -1.71
CLDN6P56747 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.38□□□□□ -1.71
CLDN6P56747 HNRNPRP2-201ENST00000528421 743 ntBASIC4.38□□□□□ -1.71
CLDN6P56747 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.38□□□□□ -1.71
CLDN6P56747 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.38□□□□□ -1.71
CLDN6P56747 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.38□□□□□ -1.71
CLDN6P56747 AC093227.2-201ENST00000589357 285 ntBASIC4.38□□□□□ -1.71
CLDN6P56747 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.38□□□□□ -1.71
CLDN6P56747 AC096553.1-201ENST00000605169 829 ntBASIC4.38□□□□□ -1.71
CLDN6P56747 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.38□□□□□ -1.71
CLDN6P56747 AC006133.1-201ENST00000617106 264 ntBASIC4.38□□□□□ -1.71
CLDN6P56747 AC112200.1-201ENST00000625015 234 ntBASIC4.38□□□□□ -1.71
CLDN6P56747 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.38□□□□□ -1.71
CLDN6P56747 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLDN6P56747 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLDN6P56747 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.38□□□□□ -1.71
CLDN6P56747 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLDN6P56747 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.38□□□□□ -1.71
CLDN6P56747 CYP1D1P-201ENST00000416662 1433 ntBASIC4.38□□□□□ -1.71
CLDN6P56747 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN6P56747 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN6P56747 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN6P56747 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.37□□□□□ -1.71
CLDN6P56747 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
CLDN6P56747 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN6P56747 AC008033.1-201ENST00000216407 1162 ntBASIC4.37□□□□□ -1.71
CLDN6P56747 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN6P56747 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN6P56747 RNU6-697P-201ENST00000363348 107 ntBASIC4.37□□□□□ -1.71
CLDN6P56747 RNU1-132P-201ENST00000364300 164 ntBASIC4.37□□□□□ -1.71
CLDN6P56747 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN6P56747 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.37□□□□□ -1.71
CLDN6P56747 ARL4AP5-201ENST00000404372 599 ntBASIC4.37□□□□□ -1.71
CLDN6P56747 MIR1271-201ENST00000408537 86 ntBASIC4.37□□□□□ -1.71
CLDN6P56747 RGS17P1-201ENST00000423358 553 ntBASIC4.37□□□□□ -1.71
CLDN6P56747 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.37□□□□□ -1.71
CLDN6P56747 RN7SL517P-201ENST00000462240 305 ntBASIC4.37□□□□□ -1.71
CLDN6P56747 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms