Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 OR52E7P-201ENST00000452394 933 ntBASIC4.75□□□□□ -1.65
CDH12P55289 RPL7P48-201ENST00000461513 746 ntBASIC4.75□□□□□ -1.65
CDH12P55289 AC091544.1-201ENST00000484702 348 ntBASIC4.75□□□□□ -1.65
CDH12P55289 AC091860.1-201ENST00000505723 432 ntBASIC4.75□□□□□ -1.65
CDH12P55289 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.75□□□□□ -1.65
CDH12P55289 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.75□□□□□ -1.65
CDH12P55289 PRELID3BP4-201ENST00000515476 571 ntBASIC4.75□□□□□ -1.65
CDH12P55289 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.75□□□□□ -1.65
CDH12P55289 AC083923.1-201ENST00000523708 376 ntBASIC4.75□□□□□ -1.65
CDH12P55289 OR4A2P-201ENST00000527276 913 ntBASIC4.75□□□□□ -1.65
CDH12P55289 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CDH12P55289 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.75□□□□□ -1.65
CDH12P55289 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.75□□□□□ -1.65
CDH12P55289 AC126177.5-201ENST00000549599 178 ntBASIC4.75□□□□□ -1.65
CDH12P55289 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.75□□□□□ -1.65
CDH12P55289 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.75□□□□□ -1.65
CDH12P55289 MIR548Y-201ENST00000582739 110 ntBASIC4.75□□□□□ -1.65
CDH12P55289 MIR3936-201ENST00000584304 110 ntBASIC4.75□□□□□ -1.65
CDH12P55289 AC015688.2-201ENST00000584523 262 ntBASIC4.75□□□□□ -1.65
CDH12P55289 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.75□□□□□ -1.65
CDH12P55289 AC061975.8-201ENST00000587058 721 ntBASIC4.75□□□□□ -1.65
CDH12P55289 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CDH12P55289 BNIP3P24-201ENST00000593398 557 ntBASIC4.75□□□□□ -1.65
CDH12P55289 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.75□□□□□ -1.65
CDH12P55289 AC093783.1-201ENST00000612976 329 ntBASIC4.75□□□□□ -1.65
CDH12P55289 MIR6861-201ENST00000618657 64 ntBASIC4.75□□□□□ -1.65
CDH12P55289 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CDH12P55289 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.75□□□□□ -1.65
CDH12P55289 AP001962.1-201ENST00000624114 559 ntBASIC4.75□□□□□ -1.65
CDH12P55289 AC004777.1-201ENST00000624317 287 ntBASIC4.75□□□□□ -1.65
CDH12P55289 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.75□□□□□ -1.65
CDH12P55289 U6.107-201ENST00000637108 79 ntBASIC4.75□□□□□ -1.65
CDH12P55289 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CDH12P55289 SCARNA15-201ENST00000607520 4325 ntBASIC4.75□□□□□ -1.65
CDH12P55289 AL731566.1-201ENST00000620490 1937 ntBASIC4.75□□□□□ -1.65
CDH12P55289 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.75□□□□□ -1.65
CDH12P55289 STX3-208ENST00000641815 3236 ntBASIC4.75□□□□□ -1.65
CDH12P55289 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDH12P55289 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.75□□□□□ -1.65
CDH12P55289 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CDH12P55289 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CDH12P55289 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDH12P55289 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CDH12P55289 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.75□□□□□ -1.65
CDH12P55289 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDH12P55289 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.74□□□□□ -1.65
CDH12P55289 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CDH12P55289 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CDH12P55289 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CDH12P55289 SEC63P2-201ENST00000503863 1939 ntBASIC4.74□□□□□ -1.65
CDH12P55289 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.74□□□□□ -1.65
CDH12P55289 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.74□□□□□ -1.65
CDH12P55289 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CDH12P55289 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.74□□□□□ -1.65
CDH12P55289 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CDH12P55289 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CDH12P55289 RNU1-87P-201ENST00000363727 170 ntBASIC4.74□□□□□ -1.65
CDH12P55289 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CDH12P55289 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CDH12P55289 AL035419.1-201ENST00000397037 564 ntBASIC4.74□□□□□ -1.65
CDH12P55289 LINC01881-201ENST00000416103 412 ntBASIC4.74□□□□□ -1.65
CDH12P55289 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.74□□□□□ -1.65
CDH12P55289 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.74□□□□□ -1.65
CDH12P55289 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.74□□□□□ -1.65
CDH12P55289 AC104843.2-201ENST00000427666 297 ntBASIC4.74□□□□□ -1.65
CDH12P55289 HIGD1AP12-201ENST00000427832 281 ntBASIC4.74□□□□□ -1.65
CDH12P55289 FAM96AP1-201ENST00000430879 482 ntBASIC4.74□□□□□ -1.65
CDH12P55289 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.74□□□□□ -1.65
CDH12P55289 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.74□□□□□ -1.65
CDH12P55289 SETP8-201ENST00000435341 628 ntBASIC4.74□□□□□ -1.65
CDH12P55289 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.74□□□□□ -1.65
CDH12P55289 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.74□□□□□ -1.65
CDH12P55289 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.74□□□□□ -1.65
CDH12P55289 RPS29P10-201ENST00000439197 166 ntBASIC4.74□□□□□ -1.65
CDH12P55289 AC068135.1-201ENST00000446164 246 ntBASIC4.74□□□□□ -1.65
CDH12P55289 AC112492.1-201ENST00000449607 712 ntBASIC4.74□□□□□ -1.65
CDH12P55289 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CDH12P55289 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.74□□□□□ -1.65
CDH12P55289 AL356981.1-201ENST00000454879 684 ntBASIC4.74□□□□□ -1.65
CDH12P55289 AL133445.1-201ENST00000467051 452 ntBASIC4.74□□□□□ -1.65
CDH12P55289 RPL7P6-201ENST00000480903 738 ntBASIC4.74□□□□□ -1.65
CDH12P55289 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.74□□□□□ -1.65
CDH12P55289 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.74□□□□□ -1.65
CDH12P55289 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.74□□□□□ -1.65
CDH12P55289 HPRT1P2-201ENST00000505250 544 ntBASIC4.74□□□□□ -1.65
CDH12P55289 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.74□□□□□ -1.65
CDH12P55289 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC4.74□□□□□ -1.65
CDH12P55289 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.74□□□□□ -1.65
CDH12P55289 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.74□□□□□ -1.65
CDH12P55289 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.74□□□□□ -1.65
CDH12P55289 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.74□□□□□ -1.65
CDH12P55289 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.74□□□□□ -1.65
CDH12P55289 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.74□□□□□ -1.65
CDH12P55289 CYP2C60P-201ENST00000566088 139 ntBASIC4.74□□□□□ -1.65
CDH12P55289 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.74□□□□□ -1.65
CDH12P55289 AC069366.1-201ENST00000583159 838 ntBASIC4.74□□□□□ -1.65
CDH12P55289 RN7SL435P-201ENST00000584418 282 ntBASIC4.74□□□□□ -1.65
CDH12P55289 AC091057.2-201ENST00000602594 792 ntBASIC4.74□□□□□ -1.65
CDH12P55289 AL589674.2-201ENST00000604304 337 ntBASIC4.74□□□□□ -1.65
CDH12P55289 AC114878.2-201ENST00000604863 1251 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms