Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 VN1R51P-201ENST00000411675 945 ntBASIC4.53□□□□□ -1.68
CDH11P55287 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.53□□□□□ -1.68
CDH11P55287 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.53□□□□□ -1.68
CDH11P55287 TCEA1P2-201ENST00000420496 906 ntBASIC4.53□□□□□ -1.68
CDH11P55287 RPS4XP16-201ENST00000427198 791 ntBASIC4.53□□□□□ -1.68
CDH11P55287 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.53□□□□□ -1.68
CDH11P55287 AC005189.1-201ENST00000431286 310 ntBASIC4.53□□□□□ -1.68
CDH11P55287 RPS7P2-201ENST00000435134 607 ntBASIC4.53□□□□□ -1.68
CDH11P55287 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.53□□□□□ -1.68
CDH11P55287 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.53□□□□□ -1.68
CDH11P55287 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.53□□□□□ -1.68
CDH11P55287 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.53□□□□□ -1.68
CDH11P55287 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CDH11P55287 AC107015.1-201ENST00000466902 747 ntBASIC4.53□□□□□ -1.68
CDH11P55287 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.53□□□□□ -1.68
CDH11P55287 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.53□□□□□ -1.68
CDH11P55287 AC090114.3-201ENST00000479267 829 ntBASIC4.53□□□□□ -1.68
CDH11P55287 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.53□□□□□ -1.68
CDH11P55287 RN7SL97P-201ENST00000486780 299 ntBASIC4.53□□□□□ -1.68
CDH11P55287 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.53□□□□□ -1.68
CDH11P55287 AC020890.1-201ENST00000491837 504 ntBASIC4.53□□□□□ -1.68
CDH11P55287 AC231760.1-201ENST00000498002 260 ntBASIC4.53□□□□□ -1.68
CDH11P55287 NDUFB5P1-201ENST00000508134 564 ntBASIC4.53□□□□□ -1.68
CDH11P55287 RNU6-1004P-201ENST00000516584 111 ntBASIC4.53□□□□□ -1.68
CDH11P55287 RN7SKP147-201ENST00000517154 244 ntBASIC4.53□□□□□ -1.68
CDH11P55287 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.53□□□□□ -1.68
CDH11P55287 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CDH11P55287 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CDH11P55287 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC4.53□□□□□ -1.68
CDH11P55287 AC084759.1-201ENST00000561168 290 ntBASIC4.53□□□□□ -1.68
CDH11P55287 AL109741.3-201ENST00000561748 592 ntBASIC4.53□□□□□ -1.68
CDH11P55287 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.53□□□□□ -1.68
CDH11P55287 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.53□□□□□ -1.68
CDH11P55287 AC017076.1-201ENST00000607613 578 ntBASIC4.53□□□□□ -1.68
CDH11P55287 AC027449.1-201ENST00000608890 407 ntBASIC4.53□□□□□ -1.68
CDH11P55287 AC245100.7-201ENST00000609678 442 ntBASIC4.53□□□□□ -1.68
CDH11P55287 Mico1.1-201ENST00000611698 204 ntBASIC4.53□□□□□ -1.68
CDH11P55287 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.53□□□□□ -1.68
CDH11P55287 AC074140.1-201ENST00000621617 208 ntBASIC4.53□□□□□ -1.68
CDH11P55287 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.53□□□□□ -1.68
CDH11P55287 LINC01739-205ENST00000641890 573 ntBASIC4.53□□□□□ -1.68
CDH11P55287 SALL4P2-201ENST00000423288 2910 ntBASIC4.53□□□□□ -1.68
CDH11P55287 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CDH11P55287 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.53□□□□□ -1.68
CDH11P55287 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.53□□□□□ -1.68
CDH11P55287 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CDH11P55287 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
CDH11P55287 AL034370.1-201ENST00000397254 1590 ntBASIC4.53□□□□□ -1.69
CDH11P55287 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDH11P55287 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CDH11P55287 SNORA73.1-201ENST00000363107 205 ntBASIC4.52□□□□□ -1.69
CDH11P55287 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDH11P55287 MIR550A3-201ENST00000390735 95 ntBASIC4.52□□□□□ -1.69
CDH11P55287 RNU6-244P-201ENST00000391028 104 ntBASIC4.52□□□□□ -1.69
CDH11P55287 ATF1P1-201ENST00000406040 927 ntBASIC4.52□□□□□ -1.69
CDH11P55287 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH11P55287 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.52□□□□□ -1.69
CDH11P55287 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH11P55287 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.52□□□□□ -1.69
CDH11P55287 LINC01347-201ENST00000417964 355 ntBASIC4.52□□□□□ -1.69
CDH11P55287 EI24P4-201ENST00000423683 1078 ntBASIC4.52□□□□□ -1.69
CDH11P55287 AC012519.1-201ENST00000424588 610 ntBASIC4.52□□□□□ -1.69
CDH11P55287 RBMY2QP-201ENST00000429799 1147 ntBASIC4.52□□□□□ -1.69
CDH11P55287 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH11P55287 AL035458.1-201ENST00000433096 585 ntBASIC4.52□□□□□ -1.69
CDH11P55287 VN1R54P-201ENST00000435210 1049 ntBASIC4.52□□□□□ -1.69
CDH11P55287 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.52□□□□□ -1.69
CDH11P55287 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH11P55287 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.52□□□□□ -1.69
CDH11P55287 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.52□□□□□ -1.69
CDH11P55287 AL591363.1-201ENST00000450091 483 ntBASIC4.52□□□□□ -1.69
CDH11P55287 AL691482.1-201ENST00000453255 87 ntBASIC4.52□□□□□ -1.69
CDH11P55287 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.52□□□□□ -1.69
CDH11P55287 RPS17P11-201ENST00000474297 293 ntBASIC4.52□□□□□ -1.69
CDH11P55287 BX284632.1-201ENST00000478218 541 ntBASIC4.52□□□□□ -1.69
CDH11P55287 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH11P55287 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH11P55287 AC010374.1-201ENST00000503762 1237 ntBASIC4.52□□□□□ -1.69
CDH11P55287 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH11P55287 AC010460.2-201ENST00000509054 677 ntBASIC4.52□□□□□ -1.69
CDH11P55287 AC004980.4-201ENST00000513375 203 ntBASIC4.52□□□□□ -1.69
CDH11P55287 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH11P55287 RN7SKP141-201ENST00000516167 338 ntBASIC4.52□□□□□ -1.69
CDH11P55287 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.52□□□□□ -1.69
CDH11P55287 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH11P55287 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH11P55287 ZKSCAN7P1-201ENST00000543668 673 ntBASIC4.52□□□□□ -1.69
CDH11P55287 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CDH11P55287 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.52□□□□□ -1.69
CDH11P55287 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH11P55287 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.52□□□□□ -1.69
CDH11P55287 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CDH11P55287 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH11P55287 MIR4436B2-201ENST00000581415 91 ntBASIC4.52□□□□□ -1.69
CDH11P55287 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH11P55287 MIR4436B1-201ENST00000583272 91 ntBASIC4.52□□□□□ -1.69
CDH11P55287 AC011447.4-201ENST00000587562 111 ntBASIC4.52□□□□□ -1.69
CDH11P55287 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH11P55287 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.52□□□□□ -1.69
CDH11P55287 AC124016.2-201ENST00000610058 665 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms