Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 OR13C3-201ENST00000374781 1108 ntBASIC5.43□□□□□ -1.54
COPB1P53618 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.43□□□□□ -1.54
COPB1P53618 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
COPB1P53618 MIR513B-201ENST00000385136 84 ntBASIC5.43□□□□□ -1.54
COPB1P53618 RN7SKP97-201ENST00000410966 333 ntBASIC5.43□□□□□ -1.54
COPB1P53618 RNU4-74P-201ENST00000411280 161 ntBASIC5.43□□□□□ -1.54
COPB1P53618 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.43□□□□□ -1.54
COPB1P53618 CFL1P1-202ENST00000432948 411 ntBASIC5.43□□□□□ -1.54
COPB1P53618 CR769776.1-201ENST00000441254 787 ntBASIC5.43□□□□□ -1.54
COPB1P53618 MTND2P22-201ENST00000444325 1033 ntBASIC5.43□□□□□ -1.54
COPB1P53618 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.43□□□□□ -1.54
COPB1P53618 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.43□□□□□ -1.54
COPB1P53618 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC5.43□□□□□ -1.54
COPB1P53618 AC004022.1-201ENST00000447766 1066 ntBASIC5.43□□□□□ -1.54
COPB1P53618 CYCSP42-201ENST00000450823 238 ntBASIC5.43□□□□□ -1.54
COPB1P53618 Z95152.1-201ENST00000453556 656 ntBASIC5.43□□□□□ -1.54
COPB1P53618 AC092155.2-201ENST00000454675 477 ntBASIC5.43□□□□□ -1.54
COPB1P53618 SEPT7P3-201ENST00000455017 621 ntBASIC5.43□□□□□ -1.54
COPB1P53618 AC008280.2-201ENST00000455473 307 ntBASIC5.43□□□□□ -1.54
COPB1P53618 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COPB1P53618 RN7SL517P-201ENST00000462240 305 ntBASIC5.43□□□□□ -1.54
COPB1P53618 RN7SL515P-201ENST00000463999 297 ntBASIC5.43□□□□□ -1.54
COPB1P53618 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC5.43□□□□□ -1.54
COPB1P53618 AC006499.3-201ENST00000506077 748 ntBASIC5.43□□□□□ -1.54
COPB1P53618 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.43□□□□□ -1.54
COPB1P53618 AP002373.2-201ENST00000541631 1060 ntBASIC5.43□□□□□ -1.54
COPB1P53618 AL049779.2-201ENST00000553847 315 ntBASIC5.43□□□□□ -1.54
COPB1P53618 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC5.43□□□□□ -1.54
COPB1P53618 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.43□□□□□ -1.54
COPB1P53618 AC023824.3-201ENST00000569003 562 ntBASIC5.43□□□□□ -1.54
COPB1P53618 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.43□□□□□ -1.54
COPB1P53618 AC105254.2-201ENST00000603636 436 ntBASIC5.43□□□□□ -1.54
COPB1P53618 AC092954.1-201ENST00000609121 445 ntBASIC5.43□□□□□ -1.54
COPB1P53618 AC084782.3-201ENST00000612282 578 ntBASIC5.43□□□□□ -1.54
COPB1P53618 AL049794.2-201ENST00000616301 365 ntBASIC5.43□□□□□ -1.54
COPB1P53618 AC015660.5-201ENST00000623238 564 ntBASIC5.43□□□□□ -1.54
COPB1P53618 AC112694.2-201ENST00000623697 768 ntBASIC5.43□□□□□ -1.54
COPB1P53618 AP002967.1-201ENST00000624203 539 ntBASIC5.43□□□□□ -1.54
COPB1P53618 AC092159.4-201ENST00000624944 550 ntBASIC5.43□□□□□ -1.54
COPB1P53618 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
COPB1P53618 AC112255.1-201ENST00000624070 2493 ntBASIC5.43□□□□□ -1.54
COPB1P53618 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COPB1P53618 ZNF652P1-201ENST00000442420 1309 ntBASIC5.43□□□□□ -1.54
COPB1P53618 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
COPB1P53618 C4BPAP1-201ENST00000415474 1893 ntBASIC5.43□□□□□ -1.54
COPB1P53618 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COPB1P53618 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.42□□□□□ -1.54
COPB1P53618 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COPB1P53618 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COPB1P53618 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COPB1P53618 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COPB1P53618 CASC19-206ENST00000641028 1430 ntBASIC5.42□□□□□ -1.54
COPB1P53618 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COPB1P53618 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
COPB1P53618 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
COPB1P53618 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.42□□□□□ -1.54
COPB1P53618 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
COPB1P53618 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COPB1P53618 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COPB1P53618 RNU5B-1-201ENST00000363286 116 ntBASIC5.42□□□□□ -1.54
COPB1P53618 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
COPB1P53618 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COPB1P53618 AL603865.2-201ENST00000401679 213 ntBASIC5.42□□□□□ -1.54
COPB1P53618 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.42□□□□□ -1.54
COPB1P53618 RN7SKP126-201ENST00000411143 300 ntBASIC5.42□□□□□ -1.54
COPB1P53618 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.42□□□□□ -1.54
COPB1P53618 CBX1P3-201ENST00000413296 527 ntBASIC5.42□□□□□ -1.54
COPB1P53618 LIPT1P1-201ENST00000415870 1186 ntBASIC5.42□□□□□ -1.54
COPB1P53618 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.42□□□□□ -1.54
COPB1P53618 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC5.42□□□□□ -1.54
COPB1P53618 RGS17P1-201ENST00000423358 553 ntBASIC5.42□□□□□ -1.54
COPB1P53618 MTND5P25-201ENST00000430499 799 ntBASIC5.42□□□□□ -1.54
COPB1P53618 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.42□□□□□ -1.54
COPB1P53618 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.42□□□□□ -1.54
COPB1P53618 SNRPFP2-201ENST00000440710 251 ntBASIC5.42□□□□□ -1.54
COPB1P53618 AC069540.1-201ENST00000446320 988 ntBASIC5.42□□□□□ -1.54
COPB1P53618 AL157827.1-201ENST00000447622 132 ntBASIC5.42□□□□□ -1.54
COPB1P53618 MTND6P5-201ENST00000448266 512 ntBASIC5.42□□□□□ -1.54
COPB1P53618 AC092647.2-201ENST00000452998 253 ntBASIC5.42□□□□□ -1.54
COPB1P53618 SBDSP1-204ENST00000453858 737 ntBASIC5.42□□□□□ -1.54
COPB1P53618 AC011225.1-201ENST00000457751 369 ntBASIC5.42□□□□□ -1.54
COPB1P53618 NAP1L1P3-201ENST00000462291 880 ntBASIC5.42□□□□□ -1.54
COPB1P53618 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.42□□□□□ -1.54
COPB1P53618 AP000563.1-201ENST00000490865 758 ntBASIC5.42□□□□□ -1.54
COPB1P53618 AC082651.2-201ENST00000496833 166 ntBASIC5.42□□□□□ -1.54
COPB1P53618 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COPB1P53618 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.42□□□□□ -1.54
COPB1P53618 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.42□□□□□ -1.54
COPB1P53618 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.42□□□□□ -1.54
COPB1P53618 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.42□□□□□ -1.54
COPB1P53618 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
COPB1P53618 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.42□□□□□ -1.54
COPB1P53618 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.42□□□□□ -1.54
COPB1P53618 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.42□□□□□ -1.54
COPB1P53618 ZNF971P-201ENST00000562068 1249 ntBASIC5.42□□□□□ -1.54
COPB1P53618 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC5.42□□□□□ -1.54
COPB1P53618 RN7SL622P-201ENST00000585292 275 ntBASIC5.42□□□□□ -1.54
COPB1P53618 IMMP1LP3-201ENST00000604197 224 ntBASIC5.42□□□□□ -1.54
COPB1P53618 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.42□□□□□ -1.54
COPB1P53618 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms