Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.25□□□□□ -1.73
RFC3P40938 AL049830.4-201ENST00000555149 351 ntBASIC4.25□□□□□ -1.73
RFC3P40938 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.25□□□□□ -1.73
RFC3P40938 AC105129.1-201ENST00000560250 297 ntBASIC4.25□□□□□ -1.73
RFC3P40938 MIR4284-201ENST00000578924 81 ntBASIC4.25□□□□□ -1.73
RFC3P40938 AC069061.3-201ENST00000582254 823 ntBASIC4.25□□□□□ -1.73
RFC3P40938 AL133338.2-201ENST00000604292 736 ntBASIC4.25□□□□□ -1.73
RFC3P40938 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.25□□□□□ -1.73
RFC3P40938 GMCL1P2-201ENST00000605230 823 ntBASIC4.25□□□□□ -1.73
RFC3P40938 AL445423.1-201ENST00000609941 536 ntBASIC4.25□□□□□ -1.73
RFC3P40938 AC100847.1-201ENST00000611316 481 ntBASIC4.25□□□□□ -1.73
RFC3P40938 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.25□□□□□ -1.73
RFC3P40938 AC083809.1-201ENST00000615051 472 ntBASIC4.25□□□□□ -1.73
RFC3P40938 AL356274.1-201ENST00000617064 410 ntBASIC4.25□□□□□ -1.73
RFC3P40938 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.25□□□□□ -1.73
RFC3P40938 AC015722.2-201ENST00000622210 551 ntBASIC4.25□□□□□ -1.73
RFC3P40938 U3.53-201ENST00000628922 216 ntBASIC4.25□□□□□ -1.73
RFC3P40938 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
RFC3P40938 AC018529.3-201ENST00000624212 2254 ntBASIC4.25□□□□□ -1.73
RFC3P40938 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RFC3P40938 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RFC3P40938 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.25□□□□□ -1.73
RFC3P40938 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
RFC3P40938 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.25□□□□□ -1.73
RFC3P40938 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
RFC3P40938 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.24□□□□□ -1.73
RFC3P40938 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
RFC3P40938 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RFC3P40938 AL672167.1-205ENST00000641112 3080 ntBASIC4.24□□□□□ -1.73
RFC3P40938 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
RFC3P40938 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.24□□□□□ -1.73
RFC3P40938 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.24□□□□□ -1.73
RFC3P40938 RNA5SP397-201ENST00000391323 118 ntBASIC4.24□□□□□ -1.73
RFC3P40938 FABP12P1-201ENST00000401911 322 ntBASIC4.24□□□□□ -1.73
RFC3P40938 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
RFC3P40938 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.24□□□□□ -1.73
RFC3P40938 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.24□□□□□ -1.73
RFC3P40938 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RFC3P40938 TXNP2-201ENST00000443918 295 ntBASIC4.24□□□□□ -1.73
RFC3P40938 AC108463.1-201ENST00000450258 347 ntBASIC4.24□□□□□ -1.73
RFC3P40938 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RFC3P40938 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.24□□□□□ -1.73
RFC3P40938 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.24□□□□□ -1.73
RFC3P40938 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.24□□□□□ -1.73
RFC3P40938 RPL36AP41-201ENST00000493820 306 ntBASIC4.24□□□□□ -1.73
RFC3P40938 AC073073.1-201ENST00000493920 463 ntBASIC4.24□□□□□ -1.73
RFC3P40938 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.24□□□□□ -1.73
RFC3P40938 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.24□□□□□ -1.73
RFC3P40938 IGLVIV-65-201ENST00000517313 360 ntBASIC4.24□□□□□ -1.73
RFC3P40938 MYL12AP1-201ENST00000518490 515 ntBASIC4.24□□□□□ -1.73
RFC3P40938 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.24□□□□□ -1.73
RFC3P40938 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.24□□□□□ -1.73
RFC3P40938 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.24□□□□□ -1.73
RFC3P40938 AC023813.4-201ENST00000607580 580 ntBASIC4.24□□□□□ -1.73
RFC3P40938 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
RFC3P40938 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.24□□□□□ -1.73
RFC3P40938 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RFC3P40938 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.24□□□□□ -1.73
RFC3P40938 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RFC3P40938 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RFC3P40938 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
RFC3P40938 AC107068.1-201ENST00000563286 4218 ntBASIC4.24□□□□□ -1.73
RFC3P40938 AC068254.2-201ENST00000623938 3577 ntBASIC4.24□□□□□ -1.73
RFC3P40938 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
RFC3P40938 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RFC3P40938 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RFC3P40938 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RFC3P40938 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
RFC3P40938 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RFC3P40938 DDX18P5-201ENST00000534547 1306 ntBASIC4.23□□□□□ -1.73
RFC3P40938 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.23□□□□□ -1.73
RFC3P40938 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RFC3P40938 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
RFC3P40938 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.23□□□□□ -1.73
RFC3P40938 ZNF137P-201ENST00000456718 1920 ntBASIC4.23□□□□□ -1.73
RFC3P40938 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.23□□□□□ -1.73
RFC3P40938 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RFC3P40938 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.23□□□□□ -1.73
RFC3P40938 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RFC3P40938 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
RFC3P40938 RNU4-39P-201ENST00000362455 127 ntBASIC4.23□□□□□ -1.73
RFC3P40938 MIR129-1-201ENST00000384972 72 ntBASIC4.23□□□□□ -1.73
RFC3P40938 AL590762.2-201ENST00000395798 571 ntBASIC4.23□□□□□ -1.73
RFC3P40938 AL512430.2-201ENST00000406786 339 ntBASIC4.23□□□□□ -1.73
RFC3P40938 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RFC3P40938 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.23□□□□□ -1.73
RFC3P40938 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.23□□□□□ -1.73
RFC3P40938 GLUD1P9-201ENST00000420997 1173 ntBASIC4.23□□□□□ -1.73
RFC3P40938 AL732292.1-201ENST00000426692 226 ntBASIC4.23□□□□□ -1.73
RFC3P40938 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.23□□□□□ -1.73
RFC3P40938 CBX1P1-201ENST00000440184 427 ntBASIC4.23□□□□□ -1.73
RFC3P40938 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
RFC3P40938 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.23□□□□□ -1.73
RFC3P40938 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.23□□□□□ -1.73
RFC3P40938 RN7SL385P-201ENST00000468873 276 ntBASIC4.23□□□□□ -1.73
RFC3P40938 RPL21P126-201ENST00000470049 478 ntBASIC4.23□□□□□ -1.73
RFC3P40938 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.23□□□□□ -1.73
RFC3P40938 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.23□□□□□ -1.73
RFC3P40938 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.23□□□□□ -1.73
RFC3P40938 RPL23AP53-201ENST00000521854 457 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms