Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HMGCLP35914 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.53□□□□□ -1.68
HMGCLP35914 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HMGCLP35914 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HMGCLP35914 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
HMGCLP35914 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
HMGCLP35914 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
HMGCLP35914 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HMGCLP35914 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
HMGCLP35914 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.53□□□□□ -1.68
HMGCLP35914 AL356806.1-201ENST00000422524 916 ntBASIC4.53□□□□□ -1.68
HMGCLP35914 AL445528.1-201ENST00000426330 420 ntBASIC4.53□□□□□ -1.68
HMGCLP35914 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HMGCLP35914 PPIAP13-201ENST00000434706 478 ntBASIC4.53□□□□□ -1.68
HMGCLP35914 RPL23AP93-201ENST00000440847 484 ntBASIC4.53□□□□□ -1.68
HMGCLP35914 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HMGCLP35914 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.53□□□□□ -1.68
HMGCLP35914 RPL23AP65-201ENST00000475608 468 ntBASIC4.53□□□□□ -1.68
HMGCLP35914 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.53□□□□□ -1.68
HMGCLP35914 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HMGCLP35914 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HMGCLP35914 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
HMGCLP35914 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.53□□□□□ -1.68
HMGCLP35914 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.53□□□□□ -1.68
HMGCLP35914 CDH12P4-201ENST00000517835 295 ntBASIC4.53□□□□□ -1.68
HMGCLP35914 CDH12P3-201ENST00000517935 295 ntBASIC4.53□□□□□ -1.68
HMGCLP35914 CDH12P1-201ENST00000518435 295 ntBASIC4.53□□□□□ -1.68
HMGCLP35914 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.53□□□□□ -1.68
HMGCLP35914 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.53□□□□□ -1.68
HMGCLP35914 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.53□□□□□ -1.68
HMGCLP35914 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HMGCLP35914 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.53□□□□□ -1.68
HMGCLP35914 AL731537.2-201ENST00000561565 951 ntBASIC4.53□□□□□ -1.68
HMGCLP35914 AC090312.1-201ENST00000580637 348 ntBASIC4.53□□□□□ -1.68
HMGCLP35914 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.53□□□□□ -1.68
HMGCLP35914 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.53□□□□□ -1.68
HMGCLP35914 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC4.53□□□□□ -1.68
HMGCLP35914 RPL7P50-201ENST00000600588 727 ntBASIC4.53□□□□□ -1.68
HMGCLP35914 BX323046.1-201ENST00000610145 535 ntBASIC4.53□□□□□ -1.68
HMGCLP35914 AC100847.1-201ENST00000611316 481 ntBASIC4.53□□□□□ -1.68
HMGCLP35914 AL049536.1-201ENST00000625043 744 ntBASIC4.53□□□□□ -1.68
HMGCLP35914 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HMGCLP35914 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HMGCLP35914 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
HMGCLP35914 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
HMGCLP35914 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.53□□□□□ -1.69
HMGCLP35914 AC091046.3-201ENST00000631455 1574 ntBASIC4.53□□□□□ -1.69
HMGCLP35914 ASNSP1-201ENST00000518311 1939 ntBASIC4.52□□□□□ -1.69
HMGCLP35914 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.52□□□□□ -1.69
HMGCLP35914 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.52□□□□□ -1.69
HMGCLP35914 MAPK10-303ENST00000641324 3959 ntBASIC4.52□□□□□ -1.69
HMGCLP35914 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HMGCLP35914 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
HMGCLP35914 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
HMGCLP35914 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.52□□□□□ -1.69
HMGCLP35914 RNU6-398P-201ENST00000384143 109 ntBASIC4.52□□□□□ -1.69
HMGCLP35914 MIR585-201ENST00000384887 94 ntBASIC4.52□□□□□ -1.69
HMGCLP35914 MIR659-201ENST00000384963 97 ntBASIC4.52□□□□□ -1.69
HMGCLP35914 AL121834.1-202ENST00000404494 277 ntBASIC4.52□□□□□ -1.69
HMGCLP35914 AC016769.2-201ENST00000414815 475 ntBASIC4.52□□□□□ -1.69
HMGCLP35914 AL590623.1-201ENST00000427864 105 ntBASIC4.52□□□□□ -1.69
HMGCLP35914 MAPRE1P3-201ENST00000435438 796 ntBASIC4.52□□□□□ -1.69
HMGCLP35914 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.52□□□□□ -1.69
HMGCLP35914 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.52□□□□□ -1.69
HMGCLP35914 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.52□□□□□ -1.69
HMGCLP35914 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.52□□□□□ -1.69
HMGCLP35914 RPL23AP43-201ENST00000446445 471 ntBASIC4.52□□□□□ -1.69
HMGCLP35914 OR52A4P-201ENST00000472867 958 ntBASIC4.52□□□□□ -1.69
HMGCLP35914 AC105918.1-201ENST00000474399 838 ntBASIC4.52□□□□□ -1.69
HMGCLP35914 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
HMGCLP35914 RPL23AP72-201ENST00000492447 435 ntBASIC4.52□□□□□ -1.69
HMGCLP35914 AC108022.1-201ENST00000493466 478 ntBASIC4.52□□□□□ -1.69
HMGCLP35914 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.52□□□□□ -1.69
HMGCLP35914 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.52□□□□□ -1.69
HMGCLP35914 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.52□□□□□ -1.69
HMGCLP35914 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HMGCLP35914 AC234771.5-201ENST00000600161 514 ntBASIC4.52□□□□□ -1.69
HMGCLP35914 AC140113.4-201ENST00000622087 222 ntBASIC4.52□□□□□ -1.69
HMGCLP35914 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.52□□□□□ -1.69
HMGCLP35914 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.52□□□□□ -1.69
HMGCLP35914 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.52□□□□□ -1.69
HMGCLP35914 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
HMGCLP35914 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.52□□□□□ -1.69
HMGCLP35914 A2MP1-204ENST00000566278 4130 ntBASIC4.52□□□□□ -1.69
HMGCLP35914 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
HMGCLP35914 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.52□□□□□ -1.69
HMGCLP35914 AC053481.2-202ENST00000582394 1500 ntBASIC4.51□□□□□ -1.69
HMGCLP35914 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HMGCLP35914 OR10AB1P-202ENST00000641219 1686 ntBASIC4.51□□□□□ -1.69
HMGCLP35914 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HMGCLP35914 AC090971.4-201ENST00000560291 1800 ntBASIC4.51□□□□□ -1.69
HMGCLP35914 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HMGCLP35914 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.51□□□□□ -1.69
HMGCLP35914 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HMGCLP35914 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HMGCLP35914 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HMGCLP35914 EOGT-210ENST00000615922 1931 ntBASIC4.51□□□□□ -1.69
HMGCLP35914 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
HMGCLP35914 RNA5SP151-201ENST00000365632 117 ntBASIC4.51□□□□□ -1.69
HMGCLP35914 RPS4XP9-201ENST00000405151 780 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms