Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 RN7SL802P-201ENST00000577858 299 ntBASIC3.91□□□□□ -1.78
HLA-DMAP28067 SNORD95-201ENST00000579879 68 ntBASIC3.91□□□□□ -1.78
HLA-DMAP28067 MIR4691-201ENST00000583764 85 ntBASIC3.91□□□□□ -1.78
HLA-DMAP28067 AC022726.1-201ENST00000587475 207 ntBASIC3.91□□□□□ -1.78
HLA-DMAP28067 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC3.91□□□□□ -1.78
HLA-DMAP28067 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.91□□□□□ -1.78
HLA-DMAP28067 MEMO1P5-201ENST00000604810 406 ntBASIC3.91□□□□□ -1.78
HLA-DMAP28067 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC3.91□□□□□ -1.78
HLA-DMAP28067 AC004477.3-201ENST00000614061 590 ntBASIC3.91□□□□□ -1.78
HLA-DMAP28067 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.91□□□□□ -1.78
HLA-DMAP28067 AC145207.9-201ENST00000623802 325 ntBASIC3.91□□□□□ -1.78
HLA-DMAP28067 TEX41-254ENST00000626394 423 ntTSL 5 BASIC3.91□□□□□ -1.78
HLA-DMAP28067 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.91□□□□□ -1.78
HLA-DMAP28067 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC3.91□□□□□ -1.78
HLA-DMAP28067 ZFRP1-201ENST00000457579 2970 ntBASIC3.91□□□□□ -1.78
HLA-DMAP28067 AL139811.1-201ENST00000424779 2299 ntBASIC3.91□□□□□ -1.78
HLA-DMAP28067 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.91□□□□□ -1.78
HLA-DMAP28067 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HLA-DMAP28067 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
HLA-DMAP28067 AC093311.1-201ENST00000506586 2021 ntBASIC3.9□□□□□ -1.78
HLA-DMAP28067 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
HLA-DMAP28067 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC3.9□□□□□ -1.78
HLA-DMAP28067 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.9□□□□□ -1.79
HLA-DMAP28067 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DMAP28067 AL031985.1-201ENST00000392713 418 ntBASIC3.9□□□□□ -1.79
HLA-DMAP28067 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC3.9□□□□□ -1.79
HLA-DMAP28067 AL513325.1-201ENST00000417716 1034 ntBASIC3.9□□□□□ -1.79
HLA-DMAP28067 CDY14P-201ENST00000431260 1014 ntBASIC3.9□□□□□ -1.79
HLA-DMAP28067 RPS29P14-201ENST00000431518 171 ntBASIC3.9□□□□□ -1.79
HLA-DMAP28067 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.9□□□□□ -1.79
HLA-DMAP28067 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC3.9□□□□□ -1.79
HLA-DMAP28067 NDUFA5P1-201ENST00000433858 341 ntBASIC3.9□□□□□ -1.79
HLA-DMAP28067 AL138899.2-201ENST00000439139 499 ntBASIC3.9□□□□□ -1.79
HLA-DMAP28067 CDY12P-201ENST00000440679 1015 ntBASIC3.9□□□□□ -1.79
HLA-DMAP28067 CDY13P-201ENST00000445813 1015 ntBASIC3.9□□□□□ -1.79
HLA-DMAP28067 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC3.9□□□□□ -1.79
HLA-DMAP28067 AC239809.1-201ENST00000450470 217 ntBASIC3.9□□□□□ -1.79
HLA-DMAP28067 CDY23P-201ENST00000451661 1014 ntBASIC3.9□□□□□ -1.79
HLA-DMAP28067 AC079168.2-201ENST00000453977 416 ntBASIC3.9□□□□□ -1.79
HLA-DMAP28067 AL389915.2-201ENST00000454576 441 ntBASIC3.9□□□□□ -1.79
HLA-DMAP28067 RN7SL585P-201ENST00000470538 280 ntBASIC3.9□□□□□ -1.79
HLA-DMAP28067 OR2AO1P-201ENST00000476497 403 ntBASIC3.9□□□□□ -1.79
HLA-DMAP28067 RN7SL808P-201ENST00000496066 299 ntBASIC3.9□□□□□ -1.79
HLA-DMAP28067 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC3.9□□□□□ -1.79
HLA-DMAP28067 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DMAP28067 AC091868.1-201ENST00000508746 304 ntBASIC3.9□□□□□ -1.79
HLA-DMAP28067 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC3.9□□□□□ -1.79
HLA-DMAP28067 AC018797.3-201ENST00000513388 1241 ntBASIC3.9□□□□□ -1.79
HLA-DMAP28067 RNU1-6P-201ENST00000516290 144 ntBASIC3.9□□□□□ -1.79
HLA-DMAP28067 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC3.9□□□□□ -1.79
HLA-DMAP28067 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.9□□□□□ -1.79
HLA-DMAP28067 PHBP17-201ENST00000528576 541 ntBASIC3.9□□□□□ -1.79
HLA-DMAP28067 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC3.9□□□□□ -1.79
HLA-DMAP28067 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC3.9□□□□□ -1.79
HLA-DMAP28067 OR11J2P-201ENST00000555298 907 ntBASIC3.9□□□□□ -1.79
HLA-DMAP28067 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC3.9□□□□□ -1.79
HLA-DMAP28067 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.9□□□□□ -1.79
HLA-DMAP28067 MIR4512-201ENST00000583257 77 ntBASIC3.9□□□□□ -1.79
HLA-DMAP28067 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.9□□□□□ -1.79
HLA-DMAP28067 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC3.9□□□□□ -1.79
HLA-DMAP28067 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.9□□□□□ -1.79
HLA-DMAP28067 VN1R84P-201ENST00000593697 235 ntBASIC3.9□□□□□ -1.79
HLA-DMAP28067 AC010680.3-201ENST00000604215 520 ntBASIC3.9□□□□□ -1.79
HLA-DMAP28067 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DMAP28067 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.9□□□□□ -1.79
HLA-DMAP28067 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DMAP28067 AC233968.1-201ENST00000611212 1300 ntBASIC3.9□□□□□ -1.79
HLA-DMAP28067 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.79
HLA-DMAP28067 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.9□□□□□ -1.79
HLA-DMAP28067 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DMAP28067 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DMAP28067 AL136964.1-201ENST00000622038 2990 ntBASIC3.9□□□□□ -1.79
HLA-DMAP28067 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC3.9□□□□□ -1.79
HLA-DMAP28067 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DMAP28067 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
HLA-DMAP28067 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DMAP28067 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
HLA-DMAP28067 AL391684.1-202ENST00000641293 1636 ntBASIC3.89□□□□□ -1.79
HLA-DMAP28067 AL118496.1-201ENST00000440201 1812 ntBASIC3.89□□□□□ -1.79
HLA-DMAP28067 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DMAP28067 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DMAP28067 FAM3C2-201ENST00000312214 681 ntBASIC3.89□□□□□ -1.79
HLA-DMAP28067 AC107977.1-201ENST00000355745 939 ntBASIC3.89□□□□□ -1.79
HLA-DMAP28067 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
HLA-DMAP28067 MIR3074-201ENST00000384885 81 ntBASIC3.89□□□□□ -1.79
HLA-DMAP28067 U3.30-201ENST00000391308 210 ntBASIC3.89□□□□□ -1.79
HLA-DMAP28067 CXADRP1-201ENST00000398098 1095 ntBASIC3.89□□□□□ -1.79
HLA-DMAP28067 ZSCAN12P1-201ENST00000406489 419 ntBASIC3.89□□□□□ -1.79
HLA-DMAP28067 RNA5SP178-201ENST00000410380 128 ntBASIC3.89□□□□□ -1.79
HLA-DMAP28067 DPPA2P3-201ENST00000411853 655 ntBASIC3.89□□□□□ -1.79
HLA-DMAP28067 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DMAP28067 AF228730.2-201ENST00000438784 848 ntBASIC3.89□□□□□ -1.79
HLA-DMAP28067 SLC25A18P1-201ENST00000449385 454 ntBASIC3.89□□□□□ -1.79
HLA-DMAP28067 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.89□□□□□ -1.79
HLA-DMAP28067 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC3.89□□□□□ -1.79
HLA-DMAP28067 LARP7P4-201ENST00000481075 878 ntBASIC3.89□□□□□ -1.79
HLA-DMAP28067 PPIAP19-201ENST00000486414 492 ntBASIC3.89□□□□□ -1.79
HLA-DMAP28067 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.89□□□□□ -1.79
HLA-DMAP28067 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC3.89□□□□□ -1.79
HLA-DMAP28067 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms