Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.57□□□□□ -1.68
XRCC1P18887 RN7SL354P-201ENST00000469282 294 ntBASIC4.57□□□□□ -1.68
XRCC1P18887 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.57□□□□□ -1.68
XRCC1P18887 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.57□□□□□ -1.68
XRCC1P18887 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.57□□□□□ -1.68
XRCC1P18887 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.57□□□□□ -1.68
XRCC1P18887 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.57□□□□□ -1.68
XRCC1P18887 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.57□□□□□ -1.68
XRCC1P18887 GLRXP2-201ENST00000555594 321 ntBASIC4.57□□□□□ -1.68
XRCC1P18887 AC105129.1-201ENST00000560250 297 ntBASIC4.57□□□□□ -1.68
XRCC1P18887 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.57□□□□□ -1.68
XRCC1P18887 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.57□□□□□ -1.68
XRCC1P18887 AC008745.1-201ENST00000604064 271 ntBASIC4.57□□□□□ -1.68
XRCC1P18887 HMGB1P51-201ENST00000605166 638 ntBASIC4.57□□□□□ -1.68
XRCC1P18887 OR7A19P-201ENST00000608051 733 ntBASIC4.57□□□□□ -1.68
XRCC1P18887 AC019131.2-201ENST00000609071 870 ntBASIC4.57□□□□□ -1.68
XRCC1P18887 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
XRCC1P18887 AC131238.1-201ENST00000617135 328 ntBASIC4.57□□□□□ -1.68
XRCC1P18887 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.57□□□□□ -1.68
XRCC1P18887 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.57□□□□□ -1.68
XRCC1P18887 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
XRCC1P18887 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
XRCC1P18887 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.57□□□□□ -1.68
XRCC1P18887 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.56□□□□□ -1.68
XRCC1P18887 VPS35P1-201ENST00000563400 1518 ntBASIC4.56□□□□□ -1.68
XRCC1P18887 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
XRCC1P18887 RNU1-32P-201ENST00000363937 159 ntBASIC4.56□□□□□ -1.68
XRCC1P18887 GLULP6-201ENST00000399502 913 ntBASIC4.56□□□□□ -1.68
XRCC1P18887 MIR921-201ENST00000401133 56 ntBASIC4.56□□□□□ -1.68
XRCC1P18887 Z98745.1-201ENST00000402553 494 ntBASIC4.56□□□□□ -1.68
XRCC1P18887 AC069213.2-201ENST00000420238 366 ntBASIC4.56□□□□□ -1.68
XRCC1P18887 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.56□□□□□ -1.68
XRCC1P18887 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.56□□□□□ -1.68
XRCC1P18887 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
XRCC1P18887 MTND6P18-201ENST00000439477 513 ntBASIC4.56□□□□□ -1.68
XRCC1P18887 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.56□□□□□ -1.68
XRCC1P18887 AL162591.2-201ENST00000449634 317 ntBASIC4.56□□□□□ -1.68
XRCC1P18887 AC108463.1-201ENST00000450258 347 ntBASIC4.56□□□□□ -1.68
XRCC1P18887 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
XRCC1P18887 HSPE1P22-201ENST00000456856 327 ntBASIC4.56□□□□□ -1.68
XRCC1P18887 RPL7AP28-201ENST00000464513 571 ntBASIC4.56□□□□□ -1.68
XRCC1P18887 AC090142.1-201ENST00000465776 462 ntBASIC4.56□□□□□ -1.68
XRCC1P18887 AK3P4-201ENST00000504283 583 ntBASIC4.56□□□□□ -1.68
XRCC1P18887 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.56□□□□□ -1.68
XRCC1P18887 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.56□□□□□ -1.68
XRCC1P18887 HIGD1AP5-201ENST00000529959 259 ntBASIC4.56□□□□□ -1.68
XRCC1P18887 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.56□□□□□ -1.68
XRCC1P18887 AC067805.1-201ENST00000559344 470 ntBASIC4.56□□□□□ -1.68
XRCC1P18887 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.56□□□□□ -1.68
XRCC1P18887 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.56□□□□□ -1.68
XRCC1P18887 MIR4675-201ENST00000577898 77 ntBASIC4.56□□□□□ -1.68
XRCC1P18887 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.56□□□□□ -1.68
XRCC1P18887 AC055839.1-201ENST00000634467 498 ntBASIC4.56□□□□□ -1.68
XRCC1P18887 AC119674.1-220ENST00000641502 1048 ntBASIC4.56□□□□□ -1.68
XRCC1P18887 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
XRCC1P18887 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.56□□□□□ -1.68
XRCC1P18887 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.56□□□□□ -1.68
XRCC1P18887 ZNF137P-201ENST00000456718 1920 ntBASIC4.56□□□□□ -1.68
XRCC1P18887 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
XRCC1P18887 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
XRCC1P18887 OR51H2P-202ENST00000641424 3046 ntBASIC4.56□□□□□ -1.68
XRCC1P18887 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.56□□□□□ -1.68
XRCC1P18887 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.55□□□□□ -1.68
XRCC1P18887 Z98755.1-201ENST00000407015 1384 ntBASIC4.55□□□□□ -1.68
XRCC1P18887 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.55□□□□□ -1.68
XRCC1P18887 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
XRCC1P18887 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
XRCC1P18887 RNA5SP28-201ENST00000363841 119 ntBASIC4.55□□□□□ -1.68
XRCC1P18887 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
XRCC1P18887 RNA5SP332-201ENST00000391063 115 ntBASIC4.55□□□□□ -1.68
XRCC1P18887 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.55□□□□□ -1.68
XRCC1P18887 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.55□□□□□ -1.68
XRCC1P18887 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.55□□□□□ -1.68
XRCC1P18887 PDSS1P1-201ENST00000422953 1114 ntBASIC4.55□□□□□ -1.68
XRCC1P18887 DNAJC19P7-201ENST00000428811 344 ntBASIC4.55□□□□□ -1.68
XRCC1P18887 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.55□□□□□ -1.68
XRCC1P18887 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.55□□□□□ -1.68
XRCC1P18887 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.55□□□□□ -1.68
XRCC1P18887 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.55□□□□□ -1.68
XRCC1P18887 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.55□□□□□ -1.68
XRCC1P18887 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.55□□□□□ -1.68
XRCC1P18887 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.55□□□□□ -1.68
XRCC1P18887 OR52A4P-201ENST00000472867 958 ntBASIC4.55□□□□□ -1.68
XRCC1P18887 RN7SL459P-201ENST00000481078 302 ntBASIC4.55□□□□□ -1.68
XRCC1P18887 RPL36AP41-201ENST00000493820 306 ntBASIC4.55□□□□□ -1.68
XRCC1P18887 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.55□□□□□ -1.68
XRCC1P18887 AC093720.1-201ENST00000505681 714 ntBASIC4.55□□□□□ -1.68
XRCC1P18887 AC111000.3-201ENST00000508057 576 ntBASIC4.55□□□□□ -1.68
XRCC1P18887 AC002456.2-201ENST00000509356 380 ntBASIC4.55□□□□□ -1.68
XRCC1P18887 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.55□□□□□ -1.68
XRCC1P18887 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
XRCC1P18887 AF186190.1-201ENST00000517470 480 ntBASIC4.55□□□□□ -1.68
XRCC1P18887 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.55□□□□□ -1.68
XRCC1P18887 OR4V1P-201ENST00000525394 1140 ntBASIC4.55□□□□□ -1.68
XRCC1P18887 AC109635.6-201ENST00000525487 1113 ntBASIC4.55□□□□□ -1.68
XRCC1P18887 AC107918.3-201ENST00000533272 382 ntBASIC4.55□□□□□ -1.68
XRCC1P18887 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC4.55□□□□□ -1.68
XRCC1P18887 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.55□□□□□ -1.68
XRCC1P18887 AC073137.1-201ENST00000605636 634 ntBASIC4.55□□□□□ -1.68
XRCC1P18887 SNX18P1Y-201ENST00000616231 511 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms