Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.93□□□□□ -1.46
PTPN1P18031 AL049610.1-201ENST00000423374 372 ntBASIC5.93□□□□□ -1.46
PTPN1P18031 RPL23AP4-201ENST00000427757 463 ntBASIC5.93□□□□□ -1.46
PTPN1P18031 CDY14P-201ENST00000431260 1014 ntBASIC5.93□□□□□ -1.46
PTPN1P18031 RPL7P29-201ENST00000437151 728 ntBASIC5.93□□□□□ -1.46
PTPN1P18031 USP9YP22-201ENST00000438971 294 ntBASIC5.93□□□□□ -1.46
PTPN1P18031 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.93□□□□□ -1.46
PTPN1P18031 MTCO2P25-201ENST00000447065 681 ntBASIC5.93□□□□□ -1.46
PTPN1P18031 CDY23P-201ENST00000451661 1014 ntBASIC5.93□□□□□ -1.46
PTPN1P18031 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.93□□□□□ -1.46
PTPN1P18031 CCDC75P1-201ENST00000469247 791 ntBASIC5.93□□□□□ -1.46
PTPN1P18031 RPL7P40-201ENST00000481703 745 ntBASIC5.93□□□□□ -1.46
PTPN1P18031 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.93□□□□□ -1.46
PTPN1P18031 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.93□□□□□ -1.46
PTPN1P18031 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.93□□□□□ -1.46
PTPN1P18031 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC5.93□□□□□ -1.46
PTPN1P18031 MTATP6P22-201ENST00000507369 598 ntBASIC5.93□□□□□ -1.46
PTPN1P18031 ST13P12-201ENST00000508958 1094 ntBASIC5.93□□□□□ -1.46
PTPN1P18031 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.93□□□□□ -1.46
PTPN1P18031 RPL7L1P4-201ENST00000513004 707 ntBASIC5.93□□□□□ -1.46
PTPN1P18031 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.93□□□□□ -1.46
PTPN1P18031 RNU6-678P-201ENST00000516832 109 ntBASIC5.93□□□□□ -1.46
PTPN1P18031 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC5.93□□□□□ -1.46
PTPN1P18031 AP001317.1-201ENST00000531194 960 ntBASIC5.93□□□□□ -1.46
PTPN1P18031 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC5.93□□□□□ -1.46
PTPN1P18031 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.93□□□□□ -1.46
PTPN1P18031 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.93□□□□□ -1.46
PTPN1P18031 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC5.93□□□□□ -1.46
PTPN1P18031 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.93□□□□□ -1.46
PTPN1P18031 MIR3611-201ENST00000584484 83 ntBASIC5.93□□□□□ -1.46
PTPN1P18031 WISP1-OT1-201ENST00000602893 642 ntBASIC5.93□□□□□ -1.46
PTPN1P18031 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.93□□□□□ -1.46
PTPN1P18031 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.93□□□□□ -1.46
PTPN1P18031 AC018755.4-201ENST00000619715 454 ntBASIC5.93□□□□□ -1.46
PTPN1P18031 AC099842.1-201ENST00000619919 596 ntBASIC5.93□□□□□ -1.46
PTPN1P18031 AC009878.1-201ENST00000621819 340 ntBASIC5.93□□□□□ -1.46
PTPN1P18031 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC5.93□□□□□ -1.46
PTPN1P18031 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PTPN1P18031 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PTPN1P18031 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.93□□□□□ -1.46
PTPN1P18031 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PTPN1P18031 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PTPN1P18031 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
PTPN1P18031 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
PTPN1P18031 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PTPN1P18031 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PTPN1P18031 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PTPN1P18031 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
PTPN1P18031 CASC19-248ENST00000641674 1356 ntBASIC5.93□□□□□ -1.46
PTPN1P18031 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.93□□□□□ -1.46
PTPN1P18031 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PTPN1P18031 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PTPN1P18031 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.92□□□□□ -1.46
PTPN1P18031 AL137100.1-201ENST00000556703 1620 ntBASIC5.92□□□□□ -1.46
PTPN1P18031 AC018628.1-201ENST00000624147 3819 ntBASIC5.92□□□□□ -1.46
PTPN1P18031 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.92□□□□□ -1.46
PTPN1P18031 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.92□□□□□ -1.46
PTPN1P18031 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.92□□□□□ -1.46
PTPN1P18031 AC100871.1-201ENST00000507871 1456 ntBASIC5.92□□□□□ -1.46
PTPN1P18031 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PTPN1P18031 AL121886.1-201ENST00000358609 435 ntBASIC5.92□□□□□ -1.46
PTPN1P18031 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.92□□□□□ -1.46
PTPN1P18031 RNU6-1339P-201ENST00000363574 91 ntBASIC5.92□□□□□ -1.46
PTPN1P18031 RN7SKP6-201ENST00000364795 319 ntBASIC5.92□□□□□ -1.46
PTPN1P18031 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
PTPN1P18031 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PTPN1P18031 MIR551A-201ENST00000385042 96 ntBASIC5.92□□□□□ -1.46
PTPN1P18031 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PTPN1P18031 NACAP7-201ENST00000407371 609 ntBASIC5.92□□□□□ -1.46
PTPN1P18031 UBE2V1P10-201ENST00000414685 269 ntBASIC5.92□□□□□ -1.46
PTPN1P18031 RAD23BP2-201ENST00000416003 1207 ntBASIC5.92□□□□□ -1.46
PTPN1P18031 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC5.92□□□□□ -1.46
PTPN1P18031 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.92□□□□□ -1.46
PTPN1P18031 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC5.92□□□□□ -1.46
PTPN1P18031 AL590103.1-201ENST00000434488 307 ntBASIC5.92□□□□□ -1.46
PTPN1P18031 NMNAT1P2-201ENST00000435192 860 ntBASIC5.92□□□□□ -1.46
PTPN1P18031 OR6D1P-201ENST00000436165 939 ntBASIC5.92□□□□□ -1.46
PTPN1P18031 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.92□□□□□ -1.46
PTPN1P18031 MTCO1P19-201ENST00000443487 500 ntBASIC5.92□□□□□ -1.46
PTPN1P18031 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.92□□□□□ -1.46
PTPN1P18031 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC5.92□□□□□ -1.46
PTPN1P18031 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.92□□□□□ -1.46
PTPN1P18031 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PTPN1P18031 NDUFAF4P4-201ENST00000454883 502 ntBASIC5.92□□□□□ -1.46
PTPN1P18031 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.92□□□□□ -1.46
PTPN1P18031 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC5.92□□□□□ -1.46
PTPN1P18031 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC5.92□□□□□ -1.46
PTPN1P18031 SRRM1P2-201ENST00000464531 1192 ntBASIC5.92□□□□□ -1.46
PTPN1P18031 SETP11-201ENST00000473027 690 ntBASIC5.92□□□□□ -1.46
PTPN1P18031 GAPDHP39-201ENST00000481866 979 ntBASIC5.92□□□□□ -1.46
PTPN1P18031 AC104687.1-201ENST00000485829 412 ntBASIC5.92□□□□□ -1.46
PTPN1P18031 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.92□□□□□ -1.46
PTPN1P18031 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC5.92□□□□□ -1.46
PTPN1P18031 AC091965.2-201ENST00000512324 613 ntBASIC5.92□□□□□ -1.46
PTPN1P18031 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC5.92□□□□□ -1.46
PTPN1P18031 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.92□□□□□ -1.46
PTPN1P18031 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC5.92□□□□□ -1.46
PTPN1P18031 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.92□□□□□ -1.46
PTPN1P18031 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.92□□□□□ -1.46
PTPN1P18031 PMS2P3-207ENST00000529061 717 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms