Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AC073850.1-201ENST00000449243 255 ntBASIC4.06□□□□□ -1.76
UBCP0CG48 AC239809.1-201ENST00000450470 217 ntBASIC4.06□□□□□ -1.76
UBCP0CG48 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.06□□□□□ -1.76
UBCP0CG48 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.06□□□□□ -1.76
UBCP0CG48 RPS26P3-201ENST00000470205 348 ntBASIC4.06□□□□□ -1.76
UBCP0CG48 AC090543.2-201ENST00000483963 348 ntBASIC4.06□□□□□ -1.76
UBCP0CG48 AC004057.1-201ENST00000485827 348 ntBASIC4.06□□□□□ -1.76
UBCP0CG48 ATG10-AS1-201ENST00000504846 648 ntBASIC4.06□□□□□ -1.76
UBCP0CG48 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.06□□□□□ -1.76
UBCP0CG48 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.06□□□□□ -1.76
UBCP0CG48 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.06□□□□□ -1.76
UBCP0CG48 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.06□□□□□ -1.76
UBCP0CG48 MIR1269B-201ENST00000580405 75 ntBASIC4.06□□□□□ -1.76
UBCP0CG48 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.06□□□□□ -1.76
UBCP0CG48 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.06□□□□□ -1.76
UBCP0CG48 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.06□□□□□ -1.76
UBCP0CG48 AC091905.4-201ENST00000623432 202 ntBASIC4.06□□□□□ -1.76
UBCP0CG48 AC112694.2-201ENST00000623697 768 ntBASIC4.06□□□□□ -1.76
UBCP0CG48 AC067931.1-201ENST00000624190 671 ntBASIC4.06□□□□□ -1.76
UBCP0CG48 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.06□□□□□ -1.76
UBCP0CG48 MIR6715B-201ENST00000637172 77 ntBASIC4.06□□□□□ -1.76
UBCP0CG48 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.06□□□□□ -1.76
UBCP0CG48 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.06□□□□□ -1.76
UBCP0CG48 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
UBCP0CG48 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
UBCP0CG48 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.05□□□□□ -1.76
UBCP0CG48 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
UBCP0CG48 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
UBCP0CG48 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
UBCP0CG48 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
UBCP0CG48 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.05□□□□□ -1.76
UBCP0CG48 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
UBCP0CG48 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.05□□□□□ -1.76
UBCP0CG48 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
UBCP0CG48 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
UBCP0CG48 U8.4-201ENST00000363626 134 ntBASIC4.05□□□□□ -1.76
UBCP0CG48 RNU4-4P-201ENST00000364588 130 ntBASIC4.05□□□□□ -1.76
UBCP0CG48 RNU6-171P-201ENST00000384354 107 ntBASIC4.05□□□□□ -1.76
UBCP0CG48 MIR93-201ENST00000385024 80 ntBASIC4.05□□□□□ -1.76
UBCP0CG48 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
UBCP0CG48 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
UBCP0CG48 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.05□□□□□ -1.76
UBCP0CG48 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
UBCP0CG48 RN7SKP267-201ENST00000410381 285 ntBASIC4.05□□□□□ -1.76
UBCP0CG48 RN7SKP273-201ENST00000411392 314 ntBASIC4.05□□□□□ -1.76
UBCP0CG48 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.05□□□□□ -1.76
UBCP0CG48 GSTM3P2-201ENST00000412746 530 ntBASIC4.05□□□□□ -1.76
UBCP0CG48 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.05□□□□□ -1.76
UBCP0CG48 AC093162.1-201ENST00000419682 124 ntBASIC4.05□□□□□ -1.76
UBCP0CG48 RPL23AP25-201ENST00000430973 463 ntBASIC4.05□□□□□ -1.76
UBCP0CG48 AL353748.1-201ENST00000440753 474 ntBASIC4.05□□□□□ -1.76
UBCP0CG48 HMGB3P21-201ENST00000452483 547 ntBASIC4.05□□□□□ -1.76
UBCP0CG48 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.05□□□□□ -1.76
UBCP0CG48 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.05□□□□□ -1.76
UBCP0CG48 RN7SL727P-201ENST00000482164 296 ntBASIC4.05□□□□□ -1.76
UBCP0CG48 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.05□□□□□ -1.76
UBCP0CG48 RPS6P4-201ENST00000494693 758 ntBASIC4.05□□□□□ -1.76
UBCP0CG48 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
UBCP0CG48 CDH12P2-201ENST00000504393 298 ntBASIC4.05□□□□□ -1.76
UBCP0CG48 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.05□□□□□ -1.76
UBCP0CG48 AC021146.7-201ENST00000509604 775 ntBASIC4.05□□□□□ -1.76
UBCP0CG48 PPBPP1-201ENST00000510807 373 ntBASIC4.05□□□□□ -1.76
UBCP0CG48 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
UBCP0CG48 ACTR6P1-201ENST00000514311 1104 ntBASIC4.05□□□□□ -1.76
UBCP0CG48 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.05□□□□□ -1.76
UBCP0CG48 AC090151.1-201ENST00000520784 730 ntBASIC4.05□□□□□ -1.76
UBCP0CG48 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
UBCP0CG48 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC4.05□□□□□ -1.76
UBCP0CG48 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.05□□□□□ -1.76
UBCP0CG48 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.05□□□□□ -1.76
UBCP0CG48 NPM1P47-201ENST00000560843 856 ntBASIC4.05□□□□□ -1.76
UBCP0CG48 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.05□□□□□ -1.76
UBCP0CG48 MIR3691-201ENST00000578066 90 ntBASIC4.05□□□□□ -1.76
UBCP0CG48 AC022884.3-201ENST00000579571 248 ntBASIC4.05□□□□□ -1.76
UBCP0CG48 OR1AB1P-201ENST00000585564 761 ntBASIC4.05□□□□□ -1.76
UBCP0CG48 AC008759.1-201ENST00000589783 983 ntBASIC4.05□□□□□ -1.76
UBCP0CG48 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.05□□□□□ -1.76
UBCP0CG48 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
UBCP0CG48 AC011453.2-201ENST00000603737 729 ntBASIC4.05□□□□□ -1.76
UBCP0CG48 AC067852.7-201ENST00000623270 535 ntBASIC4.05□□□□□ -1.76
UBCP0CG48 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.05□□□□□ -1.76
UBCP0CG48 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.05□□□□□ -1.76
UBCP0CG48 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
UBCP0CG48 SAMMSON-226ENST00000642089 1582 ntBASIC4.05□□□□□ -1.76
UBCP0CG48 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
UBCP0CG48 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
UBCP0CG48 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.05□□□□□ -1.76
UBCP0CG48 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.05□□□□□ -1.76
UBCP0CG48 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
UBCP0CG48 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
UBCP0CG48 AC017002.4-201ENST00000604721 1525 ntBASIC4.05□□□□□ -1.76
UBCP0CG48 AC018529.3-201ENST00000624212 2254 ntBASIC4.05□□□□□ -1.76
UBCP0CG48 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
UBCP0CG48 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
UBCP0CG48 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.05□□□□□ -1.76
UBCP0CG48 AL118496.1-201ENST00000440201 1812 ntBASIC4.05□□□□□ -1.76
UBCP0CG48 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
UBCP0CG48 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
UBCP0CG48 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
UBCP0CG48 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms