Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
HOXC4P09017 RNU6-1263P-201ENST00000384601 106 ntBASIC4.39□□□□□ -1.71
HOXC4P09017 VDAC1P9-201ENST00000412766 841 ntBASIC4.39□□□□□ -1.71
HOXC4P09017 AC234779.1-201ENST00000425910 285 ntBASIC4.39□□□□□ -1.71
HOXC4P09017 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HOXC4P09017 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.39□□□□□ -1.71
HOXC4P09017 HMGB3P10-201ENST00000434734 572 ntBASIC4.39□□□□□ -1.71
HOXC4P09017 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.39□□□□□ -1.71
HOXC4P09017 PHBP16-201ENST00000446318 950 ntBASIC4.39□□□□□ -1.71
HOXC4P09017 VN1R32P-201ENST00000452234 905 ntBASIC4.39□□□□□ -1.71
HOXC4P09017 AL445433.1-201ENST00000457507 257 ntBASIC4.39□□□□□ -1.71
HOXC4P09017 OR9N1P-201ENST00000491296 333 ntBASIC4.39□□□□□ -1.71
HOXC4P09017 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.39□□□□□ -1.71
HOXC4P09017 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.39□□□□□ -1.71
HOXC4P09017 AP001960.1-201ENST00000506494 658 ntBASIC4.39□□□□□ -1.71
HOXC4P09017 RNA5SP446-201ENST00000515955 82 ntBASIC4.39□□□□□ -1.71
HOXC4P09017 IGLVIV-65-201ENST00000517313 360 ntBASIC4.39□□□□□ -1.71
HOXC4P09017 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.39□□□□□ -1.71
HOXC4P09017 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.39□□□□□ -1.71
HOXC4P09017 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.39□□□□□ -1.71
HOXC4P09017 PSMB7P1-201ENST00000556349 514 ntBASIC4.39□□□□□ -1.71
HOXC4P09017 MIR4675-201ENST00000577898 77 ntBASIC4.39□□□□□ -1.71
HOXC4P09017 AC090953.1-201ENST00000604305 1092 ntBASIC4.39□□□□□ -1.71
HOXC4P09017 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
HOXC4P09017 AC011944.2-201ENST00000624440 683 ntBASIC4.39□□□□□ -1.71
HOXC4P09017 MIR6830-201ENST00000636015 70 ntBASIC4.39□□□□□ -1.71
HOXC4P09017 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
HOXC4P09017 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXC4P09017 AC090017.1-201ENST00000548612 1779 ntBASIC4.39□□□□□ -1.71
HOXC4P09017 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HOXC4P09017 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.39□□□□□ -1.71
HOXC4P09017 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.39□□□□□ -1.71
HOXC4P09017 MAPK10-320ENST00000641462 6696 ntBASIC4.39□□□□□ -1.71
HOXC4P09017 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.39□□□□□ -1.71
HOXC4P09017 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXC4P09017 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXC4P09017 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.38□□□□□ -1.71
HOXC4P09017 CCT8P1-201ENST00000413611 1657 ntBASIC4.38□□□□□ -1.71
HOXC4P09017 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
HOXC4P09017 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HOXC4P09017 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXC4P09017 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXC4P09017 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.38□□□□□ -1.71
HOXC4P09017 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.38□□□□□ -1.71
HOXC4P09017 RNU1-94P-201ENST00000362627 173 ntBASIC4.38□□□□□ -1.71
HOXC4P09017 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HOXC4P09017 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.38□□□□□ -1.71
HOXC4P09017 EIF4A1P1-201ENST00000420241 934 ntBASIC4.38□□□□□ -1.71
HOXC4P09017 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.38□□□□□ -1.71
HOXC4P09017 RPL36AP10-201ENST00000421785 322 ntBASIC4.38□□□□□ -1.71
HOXC4P09017 ARAFP1-201ENST00000422172 605 ntBASIC4.38□□□□□ -1.71
HOXC4P09017 RPL23AP25-201ENST00000430973 463 ntBASIC4.38□□□□□ -1.71
HOXC4P09017 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.38□□□□□ -1.71
HOXC4P09017 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.38□□□□□ -1.71
HOXC4P09017 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.38□□□□□ -1.71
HOXC4P09017 ELOCP3-201ENST00000439303 348 ntBASIC4.38□□□□□ -1.71
HOXC4P09017 RPL7P32-201ENST00000457119 744 ntBASIC4.38□□□□□ -1.71
HOXC4P09017 RPL23AP65-201ENST00000475608 468 ntBASIC4.38□□□□□ -1.71
HOXC4P09017 RPS27AP16-201ENST00000492222 470 ntBASIC4.38□□□□□ -1.71
HOXC4P09017 RN7SL812P-201ENST00000493791 279 ntBASIC4.38□□□□□ -1.71
HOXC4P09017 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.38□□□□□ -1.71
HOXC4P09017 AC106806.2-201ENST00000509365 500 ntBASIC4.38□□□□□ -1.71
HOXC4P09017 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.38□□□□□ -1.71
HOXC4P09017 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.38□□□□□ -1.71
HOXC4P09017 RN7SKP46-201ENST00000515942 234 ntBASIC4.38□□□□□ -1.71
HOXC4P09017 RNU4-18P-201ENST00000516751 149 ntBASIC4.38□□□□□ -1.71
HOXC4P09017 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HOXC4P09017 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.38□□□□□ -1.71
HOXC4P09017 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HOXC4P09017 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC4.38□□□□□ -1.71
HOXC4P09017 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.38□□□□□ -1.71
HOXC4P09017 MIR3138-201ENST00000585238 82 ntBASIC4.38□□□□□ -1.71
HOXC4P09017 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.38□□□□□ -1.71
HOXC4P09017 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.38□□□□□ -1.71
HOXC4P09017 AC113403.1-201ENST00000604910 193 ntBASIC4.38□□□□□ -1.71
HOXC4P09017 AL590392.1-201ENST00000604960 446 ntBASIC4.38□□□□□ -1.71
HOXC4P09017 IMMP1LP1-201ENST00000605170 488 ntBASIC4.38□□□□□ -1.71
HOXC4P09017 AC091979.2-201ENST00000607514 214 ntBASIC4.38□□□□□ -1.71
HOXC4P09017 AC020634.1-201ENST00000608701 549 ntBASIC4.38□□□□□ -1.71
HOXC4P09017 AL158196.1-201ENST00000616786 434 ntBASIC4.38□□□□□ -1.71
HOXC4P09017 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.38□□□□□ -1.71
HOXC4P09017 AC091905.2-201ENST00000623143 306 ntBASIC4.38□□□□□ -1.71
HOXC4P09017 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.38□□□□□ -1.71
HOXC4P09017 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HOXC4P09017 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HOXC4P09017 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HOXC4P09017 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HOXC4P09017 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXC4P09017 AC010300.1-201ENST00000600671 5134 ntBASIC4.38□□□□□ -1.71
HOXC4P09017 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXC4P09017 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HOXC4P09017 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HOXC4P09017 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.37□□□□□ -1.71
HOXC4P09017 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HOXC4P09017 NOL8P1-201ENST00000508336 3529 ntBASIC4.37□□□□□ -1.71
HOXC4P09017 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HOXC4P09017 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
HOXC4P09017 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.37□□□□□ -1.71
HOXC4P09017 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HOXC4P09017 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms