Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
APOBP04114 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
APOBP04114 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.58□□□□□ -2
APOBP04114 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC2.58□□□□□ -2
APOBP04114 RPL7P22-201ENST00000466005 733 ntBASIC2.58□□□□□ -2
APOBP04114 RPL23AP97-201ENST00000568955 471 ntBASIC2.58□□□□□ -2
APOBP04114 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC2.58□□□□□ -2
APOBP04114 AC010680.3-201ENST00000604215 520 ntBASIC2.58□□□□□ -2
APOBP04114 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC2.58□□□□□ -2
APOBP04114 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
APOBP04114 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC2.57□□□□□ -2
APOBP04114 IKZF3-217ENST00000623724 9787 ntTSL 1 (best) BASIC2.57□□□□□ -2
APOBP04114 AC011755.1-201ENST00000623763 2049 ntBASIC2.57□□□□□ -2
APOBP04114 LINC02035-201ENST00000610128 5476 ntBASIC2.57□□□□□ -2
APOBP04114 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.57□□□□□ -2
APOBP04114 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC2.57□□□□□ -2
APOBP04114 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
APOBP04114 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
APOBP04114 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC2.57□□□□□ -2
APOBP04114 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC2.57□□□□□ -2
APOBP04114 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC2.57□□□□□ -2
APOBP04114 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
APOBP04114 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC2.57□□□□□ -2
APOBP04114 AC233982.1-201ENST00000451247 436 ntBASIC2.57□□□□□ -2
APOBP04114 AL445433.1-201ENST00000457507 257 ntBASIC2.57□□□□□ -2
APOBP04114 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC2.57□□□□□ -2
APOBP04114 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
APOBP04114 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
APOBP04114 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC2.57□□□□□ -2
APOBP04114 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC2.57□□□□□ -2
APOBP04114 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
APOBP04114 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC2.57□□□□□ -2
APOBP04114 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
APOBP04114 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
APOBP04114 MIR128-1-201ENST00000384921 82 ntBASIC2.57□□□□□ -2
APOBP04114 ATP5A1P2-201ENST00000412323 255 ntBASIC2.57□□□□□ -2
APOBP04114 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC2.57□□□□□ -2
APOBP04114 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.57□□□□□ -2
APOBP04114 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC2.57□□□□□ -2
APOBP04114 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.57□□□□□ -2
APOBP04114 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
APOBP04114 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC2.57□□□□□ -2
APOBP04114 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
APOBP04114 AL672167.1-205ENST00000641112 3080 ntBASIC2.57□□□□□ -2
APOBP04114 AC083899.2-201ENST00000423285 1376 ntBASIC2.57□□□□□ -2
APOBP04114 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC2.57□□□□□ -2
APOBP04114 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC2.57□□□□□ -2
APOBP04114 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
APOBP04114 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC2.57□□□□□ -2
APOBP04114 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC2.57□□□□□ -2
APOBP04114 RPS4XP10-201ENST00000465034 731 ntBASIC2.57□□□□□ -2
APOBP04114 AL139099.1-201ENST00000497398 403 ntBASIC2.57□□□□□ -2
APOBP04114 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC2.57□□□□□ -2
APOBP04114 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.57□□□□□ -2
APOBP04114 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC2.57□□□□□ -2
APOBP04114 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC2.57□□□□□ -2
APOBP04114 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC2.57□□□□□ -2
APOBP04114 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC2.57□□□□□ -2
APOBP04114 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.57□□□□□ -2
APOBP04114 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.57□□□□□ -2
APOBP04114 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
APOBP04114 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
APOBP04114 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC2.57□□□□□ -2
APOBP04114 MTND5P1-201ENST00000445440 1375 ntBASIC2.57□□□□□ -2
APOBP04114 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC2.57□□□□□ -2
APOBP04114 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC2.57□□□□□ -2
APOBP04114 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC2.57□□□□□ -2
APOBP04114 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
APOBP04114 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC2.56□□□□□ -2
APOBP04114 AL049781.1-201ENST00000623195 3585 ntBASIC2.56□□□□□ -2
APOBP04114 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
APOBP04114 OR6C71P-201ENST00000432580 913 ntBASIC2.56□□□□□ -2
APOBP04114 RPS17P13-201ENST00000448974 407 ntBASIC2.56□□□□□ -2
APOBP04114 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC2.56□□□□□ -2
APOBP04114 CYCSP53-201ENST00000455540 265 ntBASIC2.56□□□□□ -2
APOBP04114 AC128716.1-201ENST00000475129 166 ntBASIC2.56□□□□□ -2
APOBP04114 HPRT1P2-201ENST00000505250 544 ntBASIC2.56□□□□□ -2
APOBP04114 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC2.56□□□□□ -2
APOBP04114 AC007458.1-201ENST00000542812 373 ntBASIC2.56□□□□□ -2
APOBP04114 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC2.56□□□□□ -2
APOBP04114 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC2.56□□□□□ -2
APOBP04114 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC2.56□□□□□ -2
APOBP04114 AC130352.1-201ENST00000602979 661 ntBASIC2.56□□□□□ -2
APOBP04114 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.56□□□□□ -2
APOBP04114 AC023632.6-201ENST00000624338 2177 ntBASIC2.56□□□□□ -2
APOBP04114 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC2.56□□□□□ -2
APOBP04114 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC2.56□□□□□ -2
APOBP04114 AL359922.3-201ENST00000624779 1670 ntBASIC2.56□□□□□ -2
APOBP04114 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
APOBP04114 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC2.56□□□□□ -2
APOBP04114 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
APOBP04114 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
APOBP04114 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
APOBP04114 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC2.56□□□□□ -2
APOBP04114 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC2.56□□□□□ -2
APOBP04114 FCF1P5-201ENST00000406490 482 ntBASIC2.56□□□□□ -2
APOBP04114 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.56□□□□□ -2
APOBP04114 SERPINA7P1-201ENST00000443077 631 ntBASIC2.56□□□□□ -2
APOBP04114 AC008155.2-201ENST00000464337 397 ntBASIC2.56□□□□□ -2
APOBP04114 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms