Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
COL3A1P02461 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
COL3A1P02461 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL3A1P02461 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL3A1P02461 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL3A1P02461 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
COL3A1P02461 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL3A1P02461 SNRPFP1-201ENST00000414761 252 ntBASIC5.91□□□□□ -1.46
COL3A1P02461 GAPDHP49-201ENST00000421421 961 ntBASIC5.91□□□□□ -1.46
COL3A1P02461 CR848007.2-201ENST00000424918 787 ntBASIC5.91□□□□□ -1.46
COL3A1P02461 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.91□□□□□ -1.46
COL3A1P02461 ATP5C1P1-201ENST00000441945 895 ntBASIC5.91□□□□□ -1.46
COL3A1P02461 MTND2P8-201ENST00000450555 1025 ntBASIC5.91□□□□□ -1.46
COL3A1P02461 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC5.91□□□□□ -1.46
COL3A1P02461 MTND2P6-201ENST00000455337 1030 ntBASIC5.91□□□□□ -1.46
COL3A1P02461 CR383656.1-201ENST00000484916 377 ntBASIC5.91□□□□□ -1.46
COL3A1P02461 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.91□□□□□ -1.46
COL3A1P02461 MTND1P22-201ENST00000510572 951 ntBASIC5.91□□□□□ -1.46
COL3A1P02461 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC5.91□□□□□ -1.46
COL3A1P02461 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL3A1P02461 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.91□□□□□ -1.46
COL3A1P02461 AC093510.2-201ENST00000562820 896 ntBASIC5.91□□□□□ -1.46
COL3A1P02461 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.91□□□□□ -1.46
COL3A1P02461 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC5.91□□□□□ -1.46
COL3A1P02461 AC010615.3-201ENST00000597319 394 ntBASIC5.91□□□□□ -1.46
COL3A1P02461 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.91□□□□□ -1.46
COL3A1P02461 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL3A1P02461 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5.91□□□□□ -1.46
COL3A1P02461 GMCL1P2-201ENST00000605230 823 ntBASIC5.91□□□□□ -1.46
COL3A1P02461 AC106052.1-201ENST00000608029 497 ntBASIC5.91□□□□□ -1.46
COL3A1P02461 MLECP1-201ENST00000615893 709 ntBASIC5.91□□□□□ -1.46
COL3A1P02461 AP003497.2-201ENST00000624220 967 ntBASIC5.91□□□□□ -1.46
COL3A1P02461 AP000843.1-201ENST00000624880 701 ntBASIC5.91□□□□□ -1.46
COL3A1P02461 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
COL3A1P02461 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL3A1P02461 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL3A1P02461 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL3A1P02461 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.91□□□□□ -1.46
COL3A1P02461 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL3A1P02461 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
COL3A1P02461 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
COL3A1P02461 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL3A1P02461 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL3A1P02461 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
COL3A1P02461 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.91□□□□□ -1.46
COL3A1P02461 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.91□□□□□ -1.46
COL3A1P02461 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
COL3A1P02461 AP001002.1-201ENST00000625148 1513 ntBASIC5.9□□□□□ -1.46
COL3A1P02461 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
COL3A1P02461 RNA5SP307-201ENST00000362863 116 ntBASIC5.9□□□□□ -1.46
COL3A1P02461 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.9□□□□□ -1.46
COL3A1P02461 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
COL3A1P02461 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
COL3A1P02461 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
COL3A1P02461 MTCO2P31-201ENST00000402702 684 ntBASIC5.9□□□□□ -1.46
COL3A1P02461 AC106883.1-201ENST00000418805 562 ntBASIC5.9□□□□□ -1.46
COL3A1P02461 RPS12P10-201ENST00000427031 377 ntBASIC5.9□□□□□ -1.46
COL3A1P02461 AC096638.2-201ENST00000434965 711 ntBASIC5.9□□□□□ -1.46
COL3A1P02461 AL031584.1-201ENST00000447169 754 ntBASIC5.9□□□□□ -1.46
COL3A1P02461 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC5.9□□□□□ -1.46
COL3A1P02461 RPS23P7-201ENST00000466210 444 ntBASIC5.9□□□□□ -1.46
COL3A1P02461 AL161747.1-201ENST00000480068 358 ntBASIC5.9□□□□□ -1.46
COL3A1P02461 RN7SL810P-201ENST00000493031 276 ntBASIC5.9□□□□□ -1.46
COL3A1P02461 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.9□□□□□ -1.46
COL3A1P02461 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
COL3A1P02461 AC010476.1-201ENST00000519111 851 ntBASIC5.9□□□□□ -1.46
COL3A1P02461 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.9□□□□□ -1.46
COL3A1P02461 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.9□□□□□ -1.46
COL3A1P02461 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.9□□□□□ -1.46
COL3A1P02461 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC5.9□□□□□ -1.46
COL3A1P02461 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.9□□□□□ -1.46
COL3A1P02461 AC090888.2-201ENST00000559765 1144 ntBASIC5.9□□□□□ -1.46
COL3A1P02461 MIR4472-2-201ENST00000582069 67 ntBASIC5.9□□□□□ -1.46
COL3A1P02461 NIFKP6-201ENST00000598115 845 ntBASIC5.9□□□□□ -1.46
COL3A1P02461 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.9□□□□□ -1.46
COL3A1P02461 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.9□□□□□ -1.46
COL3A1P02461 AC103792.1-201ENST00000603591 919 ntBASIC5.9□□□□□ -1.46
COL3A1P02461 AC113403.1-201ENST00000604910 193 ntBASIC5.9□□□□□ -1.46
COL3A1P02461 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.9□□□□□ -1.46
COL3A1P02461 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.9□□□□□ -1.46
COL3A1P02461 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
COL3A1P02461 AL445363.3-201ENST00000623080 671 ntBASIC5.9□□□□□ -1.46
COL3A1P02461 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
COL3A1P02461 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.9□□□□□ -1.46
COL3A1P02461 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.9□□□□□ -1.46
COL3A1P02461 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
COL3A1P02461 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
COL3A1P02461 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
COL3A1P02461 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.9□□□□□ -1.46
COL3A1P02461 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.9□□□□□ -1.47
COL3A1P02461 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.47
COL3A1P02461 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
COL3A1P02461 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.9□□□□□ -1.47
COL3A1P02461 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.9□□□□□ -1.47
COL3A1P02461 MT-RNR1-201ENST00000389680 954 ntBASIC5.9□□□□□ -1.47
COL3A1P02461 ST13P16-201ENST00000401760 781 ntBASIC5.9□□□□□ -1.47
COL3A1P02461 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.9□□□□□ -1.47
COL3A1P02461 RSL24D1P6-201ENST00000426934 401 ntBASIC5.9□□□□□ -1.47
COL3A1P02461 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC5.9□□□□□ -1.47
COL3A1P02461 USP9YP14-201ENST00000430663 563 ntBASIC5.9□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms