Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.24□□□□□ -1.73
TNFP01375 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.24□□□□□ -1.73
TNFP01375 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TNFP01375 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.24□□□□□ -1.73
TNFP01375 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
TNFP01375 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
TNFP01375 RNA5SP479-201ENST00000364858 117 ntBASIC4.24□□□□□ -1.73
TNFP01375 RNA5SP151-201ENST00000365632 117 ntBASIC4.24□□□□□ -1.73
TNFP01375 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TNFP01375 AL161909.1-201ENST00000397390 712 ntBASIC4.24□□□□□ -1.73
TNFP01375 RN7SKP235-201ENST00000410662 305 ntBASIC4.24□□□□□ -1.73
TNFP01375 SNORA74C-2-201ENST00000411179 201 ntBASIC4.24□□□□□ -1.73
TNFP01375 RN7SKP263-201ENST00000411194 309 ntBASIC4.24□□□□□ -1.73
TNFP01375 VDAC1P9-201ENST00000412766 841 ntBASIC4.24□□□□□ -1.73
TNFP01375 MFSD13B-201ENST00000420133 1290 ntBASIC4.24□□□□□ -1.73
TNFP01375 AL157831.1-201ENST00000426134 473 ntBASIC4.24□□□□□ -1.73
TNFP01375 PPIAP13-201ENST00000434706 478 ntBASIC4.24□□□□□ -1.73
TNFP01375 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.24□□□□□ -1.73
TNFP01375 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
TNFP01375 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.24□□□□□ -1.73
TNFP01375 RN7SL691P-201ENST00000494487 301 ntBASIC4.24□□□□□ -1.73
TNFP01375 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.24□□□□□ -1.73
TNFP01375 AC138938.1-201ENST00000515431 782 ntBASIC4.24□□□□□ -1.73
TNFP01375 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.24□□□□□ -1.73
TNFP01375 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.24□□□□□ -1.73
TNFP01375 AL352979.3-201ENST00000553515 247 ntBASIC4.24□□□□□ -1.73
TNFP01375 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
TNFP01375 MIR3160-1-201ENST00000577972 85 ntBASIC4.24□□□□□ -1.73
TNFP01375 FAM27D1-201ENST00000612308 341 ntBASIC4.24□□□□□ -1.73
TNFP01375 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
TNFP01375 AC090506.2-201ENST00000624521 419 ntBASIC4.24□□□□□ -1.73
TNFP01375 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.24□□□□□ -1.73
TNFP01375 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.24□□□□□ -1.73
TNFP01375 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TNFP01375 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TNFP01375 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
TNFP01375 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
TNFP01375 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TNFP01375 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
TNFP01375 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TNFP01375 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TNFP01375 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
TNFP01375 RNU1-14P-201ENST00000362759 152 ntBASIC4.23□□□□□ -1.73
TNFP01375 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
TNFP01375 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TNFP01375 AL022722.2-201ENST00000402519 180 ntBASIC4.23□□□□□ -1.73
TNFP01375 AL359643.1-201ENST00000404109 423 ntBASIC4.23□□□□□ -1.73
TNFP01375 AL078604.1-201ENST00000404609 466 ntBASIC4.23□□□□□ -1.73
TNFP01375 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.23□□□□□ -1.73
TNFP01375 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TNFP01375 RPL17P36-201ENST00000420302 549 ntBASIC4.23□□□□□ -1.73
TNFP01375 RCC2P2-201ENST00000422174 918 ntBASIC4.23□□□□□ -1.73
TNFP01375 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.23□□□□□ -1.73
TNFP01375 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.23□□□□□ -1.73
TNFP01375 RPL23AP81-201ENST00000455252 467 ntBASIC4.23□□□□□ -1.73
TNFP01375 AL591473.1-201ENST00000464297 313 ntBASIC4.23□□□□□ -1.73
TNFP01375 RPL7P22-201ENST00000466005 733 ntBASIC4.23□□□□□ -1.73
TNFP01375 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.23□□□□□ -1.73
TNFP01375 AL592156.1-201ENST00000508758 304 ntBASIC4.23□□□□□ -1.73
TNFP01375 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.23□□□□□ -1.73
TNFP01375 RNA5SP519-201ENST00000516480 119 ntBASIC4.23□□□□□ -1.73
TNFP01375 RNA5SP73-201ENST00000516744 108 ntBASIC4.23□□□□□ -1.73
TNFP01375 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.23□□□□□ -1.73
TNFP01375 AL354984.3-201ENST00000604803 325 ntBASIC4.23□□□□□ -1.73
TNFP01375 AC010857.1-201ENST00000606398 594 ntBASIC4.23□□□□□ -1.73
TNFP01375 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.23□□□□□ -1.73
TNFP01375 MIR492-201ENST00000638676 116 ntBASIC4.23□□□□□ -1.73
TNFP01375 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TNFP01375 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.23□□□□□ -1.73
TNFP01375 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TNFP01375 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TNFP01375 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
TNFP01375 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
TNFP01375 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TNFP01375 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
TNFP01375 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TNFP01375 AC097461.1-201ENST00000568928 2821 ntBASIC4.22□□□□□ -1.73
TNFP01375 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.22□□□□□ -1.73
TNFP01375 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TNFP01375 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
TNFP01375 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.22□□□□□ -1.73
TNFP01375 AP001002.1-201ENST00000625148 1513 ntBASIC4.22□□□□□ -1.73
TNFP01375 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TNFP01375 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
TNFP01375 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TNFP01375 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
TNFP01375 RNU1-44P-201ENST00000384453 163 ntBASIC4.22□□□□□ -1.73
TNFP01375 RN7SKP182-201ENST00000410772 298 ntBASIC4.22□□□□□ -1.73
TNFP01375 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.22□□□□□ -1.73
TNFP01375 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.22□□□□□ -1.73
TNFP01375 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.22□□□□□ -1.73
TNFP01375 RPL7AP52-201ENST00000458096 790 ntBASIC4.22□□□□□ -1.73
TNFP01375 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.22□□□□□ -1.73
TNFP01375 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
TNFP01375 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.22□□□□□ -1.73
TNFP01375 AC091544.1-201ENST00000484702 348 ntBASIC4.22□□□□□ -1.73
TNFP01375 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.22□□□□□ -1.73
TNFP01375 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TNFP01375 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.22□□□□□ -1.73
TNFP01375 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms