Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC3.79□□□□□ -1.8
UPK1BO75841 OR52B5P-202ENST00000641118 1110 ntBASIC3.79□□□□□ -1.8
UPK1BO75841 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
UPK1BO75841 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
UPK1BO75841 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
UPK1BO75841 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.79□□□□□ -1.8
UPK1BO75841 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.79□□□□□ -1.8
UPK1BO75841 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.78□□□□□ -1.8
UPK1BO75841 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.78□□□□□ -1.8
UPK1BO75841 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
UPK1BO75841 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
UPK1BO75841 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
UPK1BO75841 CASC19-284ENST00000642142 1868 ntBASIC3.78□□□□□ -1.8
UPK1BO75841 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
UPK1BO75841 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
UPK1BO75841 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
UPK1BO75841 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
UPK1BO75841 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
UPK1BO75841 PPCS-201ENST00000372556 984 ntTSL 2 BASIC3.78□□□□□ -1.8
UPK1BO75841 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
UPK1BO75841 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
UPK1BO75841 SNORD65-201ENST00000391079 73 ntBASIC3.78□□□□□ -1.8
UPK1BO75841 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
UPK1BO75841 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC3.78□□□□□ -1.8
UPK1BO75841 EIF4A1P3-201ENST00000411521 244 ntBASIC3.78□□□□□ -1.8
UPK1BO75841 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.78□□□□□ -1.8
UPK1BO75841 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.78□□□□□ -1.8
UPK1BO75841 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
UPK1BO75841 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.78□□□□□ -1.8
UPK1BO75841 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.78□□□□□ -1.8
UPK1BO75841 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC3.78□□□□□ -1.8
UPK1BO75841 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC3.78□□□□□ -1.8
UPK1BO75841 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC3.78□□□□□ -1.8
UPK1BO75841 AC234781.3-201ENST00000452540 973 ntBASIC3.78□□□□□ -1.8
UPK1BO75841 AC021205.1-201ENST00000468797 348 ntBASIC3.78□□□□□ -1.8
UPK1BO75841 RPL23AP72-201ENST00000492447 435 ntBASIC3.78□□□□□ -1.8
UPK1BO75841 RPL31P61-201ENST00000496160 376 ntBASIC3.78□□□□□ -1.8
UPK1BO75841 HAUS1P1-201ENST00000505275 832 ntBASIC3.78□□□□□ -1.8
UPK1BO75841 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC3.78□□□□□ -1.8
UPK1BO75841 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC3.78□□□□□ -1.8
UPK1BO75841 IGHVII-44-2-201ENST00000517728 250 ntBASIC3.78□□□□□ -1.8
UPK1BO75841 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC3.78□□□□□ -1.8
UPK1BO75841 TRIM77BP-201ENST00000524985 1119 ntBASIC3.78□□□□□ -1.8
UPK1BO75841 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.78□□□□□ -1.8
UPK1BO75841 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC3.78□□□□□ -1.8
UPK1BO75841 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC3.78□□□□□ -1.8
UPK1BO75841 AC244505.7-201ENST00000599675 272 ntBASIC3.78□□□□□ -1.8
UPK1BO75841 AC123786.2-201ENST00000603459 275 ntBASIC3.78□□□□□ -1.8
UPK1BO75841 AC010200.2-201ENST00000605098 235 ntBASIC3.78□□□□□ -1.8
UPK1BO75841 FAM27B-201ENST00000610601 213 ntBASIC3.78□□□□□ -1.8
UPK1BO75841 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC3.78□□□□□ -1.8
UPK1BO75841 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.78□□□□□ -1.8
UPK1BO75841 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
UPK1BO75841 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
UPK1BO75841 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.77□□□□□ -1.81
UPK1BO75841 AC087565.3-202ENST00000642085 1603 ntBASIC3.77□□□□□ -1.81
UPK1BO75841 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
UPK1BO75841 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.77□□□□□ -1.81
UPK1BO75841 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
UPK1BO75841 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
UPK1BO75841 RNU1-87P-201ENST00000363727 170 ntBASIC3.77□□□□□ -1.81
UPK1BO75841 RN7SKP124-201ENST00000364730 341 ntBASIC3.77□□□□□ -1.81
UPK1BO75841 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC3.77□□□□□ -1.81
UPK1BO75841 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.77□□□□□ -1.81
UPK1BO75841 SNORA37-201ENST00000384504 129 ntBASIC3.77□□□□□ -1.81
UPK1BO75841 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
UPK1BO75841 HMGN2P8-201ENST00000391458 268 ntBASIC3.77□□□□□ -1.81
UPK1BO75841 Z98745.1-201ENST00000402553 494 ntBASIC3.77□□□□□ -1.81
UPK1BO75841 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.77□□□□□ -1.81
UPK1BO75841 VDAC1P6-201ENST00000430062 855 ntBASIC3.77□□□□□ -1.81
UPK1BO75841 MTCO1P45-201ENST00000431457 267 ntBASIC3.77□□□□□ -1.81
UPK1BO75841 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.77□□□□□ -1.81
UPK1BO75841 AC097523.2-201ENST00000435551 652 ntBASIC3.77□□□□□ -1.81
UPK1BO75841 RHOT1P3-201ENST00000436571 331 ntBASIC3.77□□□□□ -1.81
UPK1BO75841 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC3.77□□□□□ -1.81
UPK1BO75841 AL357520.1-201ENST00000441557 453 ntBASIC3.77□□□□□ -1.81
UPK1BO75841 EXTL2P1-201ENST00000446218 416 ntBASIC3.77□□□□□ -1.81
UPK1BO75841 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC3.77□□□□□ -1.81
UPK1BO75841 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.77□□□□□ -1.81
UPK1BO75841 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.77□□□□□ -1.81
UPK1BO75841 AC012671.1-201ENST00000451912 203 ntBASIC3.77□□□□□ -1.81
UPK1BO75841 RAD23BP3-201ENST00000454157 1152 ntBASIC3.77□□□□□ -1.81
UPK1BO75841 AL389915.2-201ENST00000454576 441 ntBASIC3.77□□□□□ -1.81
UPK1BO75841 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC3.77□□□□□ -1.81
UPK1BO75841 RPSAP39-201ENST00000467439 883 ntBASIC3.77□□□□□ -1.81
UPK1BO75841 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC3.77□□□□□ -1.81
UPK1BO75841 RPL36AP41-201ENST00000493820 306 ntBASIC3.77□□□□□ -1.81
UPK1BO75841 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC3.77□□□□□ -1.81
UPK1BO75841 IGKV2-38-201ENST00000517443 247 ntBASIC3.77□□□□□ -1.81
UPK1BO75841 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC3.77□□□□□ -1.81
UPK1BO75841 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC3.77□□□□□ -1.81
UPK1BO75841 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.77□□□□□ -1.81
UPK1BO75841 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC3.77□□□□□ -1.81
UPK1BO75841 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.77□□□□□ -1.81
UPK1BO75841 AL352979.3-201ENST00000553515 247 ntBASIC3.77□□□□□ -1.81
UPK1BO75841 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC3.77□□□□□ -1.81
UPK1BO75841 AC090515.3-201ENST00000560431 315 ntBASIC3.77□□□□□ -1.81
UPK1BO75841 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC3.77□□□□□ -1.81
UPK1BO75841 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC3.77□□□□□ -1.81
UPK1BO75841 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms