Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SHOX2O60902 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.45□□□□□ -1.7
SHOX2O60902 RPL23P2-201ENST00000320371 421 ntBASIC4.45□□□□□ -1.7
SHOX2O60902 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SHOX2O60902 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SHOX2O60902 RNU6-1320P-201ENST00000390838 107 ntBASIC4.45□□□□□ -1.7
SHOX2O60902 RNU6-1269P-201ENST00000391139 107 ntBASIC4.45□□□□□ -1.7
SHOX2O60902 AL138878.1-201ENST00000405131 347 ntBASIC4.45□□□□□ -1.7
SHOX2O60902 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.45□□□□□ -1.7
SHOX2O60902 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.45□□□□□ -1.7
SHOX2O60902 RPL7P11-201ENST00000437586 658 ntBASIC4.45□□□□□ -1.7
SHOX2O60902 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.45□□□□□ -1.7
SHOX2O60902 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.45□□□□□ -1.7
SHOX2O60902 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.45□□□□□ -1.7
SHOX2O60902 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.45□□□□□ -1.7
SHOX2O60902 RNU6-599P-201ENST00000459383 107 ntBASIC4.45□□□□□ -1.7
SHOX2O60902 RNU6-1193P-201ENST00000459461 107 ntBASIC4.45□□□□□ -1.7
SHOX2O60902 RPS29P22-201ENST00000472363 168 ntBASIC4.45□□□□□ -1.7
SHOX2O60902 COPS8P2-201ENST00000473228 627 ntBASIC4.45□□□□□ -1.7
SHOX2O60902 AC090114.3-201ENST00000479267 829 ntBASIC4.45□□□□□ -1.7
SHOX2O60902 AGGF1P3-201ENST00000493675 1213 ntBASIC4.45□□□□□ -1.7
SHOX2O60902 AC108145.1-201ENST00000503770 153 ntBASIC4.45□□□□□ -1.7
SHOX2O60902 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.45□□□□□ -1.7
SHOX2O60902 RNA5SP497-201ENST00000516081 97 ntBASIC4.45□□□□□ -1.7
SHOX2O60902 RN7SKP34-201ENST00000516142 244 ntBASIC4.45□□□□□ -1.7
SHOX2O60902 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.45□□□□□ -1.7
SHOX2O60902 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.45□□□□□ -1.7
SHOX2O60902 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC4.45□□□□□ -1.7
SHOX2O60902 MTND2P17-201ENST00000550281 688 ntBASIC4.45□□□□□ -1.7
SHOX2O60902 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.45□□□□□ -1.7
SHOX2O60902 AL161912.3-201ENST00000605404 628 ntBASIC4.45□□□□□ -1.7
SHOX2O60902 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.45□□□□□ -1.7
SHOX2O60902 RNU6-368P-201ENST00000620928 107 ntBASIC4.45□□□□□ -1.7
SHOX2O60902 RNU6-538P-201ENST00000622329 107 ntBASIC4.45□□□□□ -1.7
SHOX2O60902 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.45□□□□□ -1.7
SHOX2O60902 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.45□□□□□ -1.7
SHOX2O60902 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SHOX2O60902 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SHOX2O60902 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SHOX2O60902 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SHOX2O60902 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.45□□□□□ -1.7
SHOX2O60902 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.45□□□□□ -1.7
SHOX2O60902 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
SHOX2O60902 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.45□□□□□ -1.7
SHOX2O60902 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SHOX2O60902 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.44□□□□□ -1.7
SHOX2O60902 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SHOX2O60902 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SHOX2O60902 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
SHOX2O60902 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.44□□□□□ -1.7
SHOX2O60902 AC099654.2-201ENST00000433031 1980 ntBASIC4.44□□□□□ -1.7
SHOX2O60902 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SHOX2O60902 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.44□□□□□ -1.7
SHOX2O60902 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.44□□□□□ -1.7
SHOX2O60902 U3.36-201ENST00000408418 213 ntBASIC4.44□□□□□ -1.7
SHOX2O60902 AL591848.1-201ENST00000413092 322 ntBASIC4.44□□□□□ -1.7
SHOX2O60902 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.44□□□□□ -1.7
SHOX2O60902 OR51A6P-201ENST00000418680 1004 ntBASIC4.44□□□□□ -1.7
SHOX2O60902 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.44□□□□□ -1.7
SHOX2O60902 H2AFZP5-201ENST00000446960 382 ntBASIC4.44□□□□□ -1.7
SHOX2O60902 NPM1P39-201ENST00000449818 867 ntBASIC4.44□□□□□ -1.7
SHOX2O60902 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.44□□□□□ -1.7
SHOX2O60902 BX284632.1-201ENST00000478218 541 ntBASIC4.44□□□□□ -1.7
SHOX2O60902 SLC25A15P5-201ENST00000508033 253 ntBASIC4.44□□□□□ -1.7
SHOX2O60902 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC4.44□□□□□ -1.7
SHOX2O60902 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.44□□□□□ -1.7
SHOX2O60902 AC122134.1-201ENST00000565664 1104 ntBASIC4.44□□□□□ -1.7
SHOX2O60902 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SHOX2O60902 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.44□□□□□ -1.7
SHOX2O60902 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.44□□□□□ -1.7
SHOX2O60902 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.44□□□□□ -1.7
SHOX2O60902 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.44□□□□□ -1.7
SHOX2O60902 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.44□□□□□ -1.7
SHOX2O60902 MEMO1P5-201ENST00000604810 406 ntBASIC4.44□□□□□ -1.7
SHOX2O60902 AC064801.1-201ENST00000612025 407 ntBASIC4.44□□□□□ -1.7
SHOX2O60902 AC068870.2-201ENST00000620635 389 ntBASIC4.44□□□□□ -1.7
SHOX2O60902 AP003072.5-201ENST00000623872 773 ntBASIC4.44□□□□□ -1.7
SHOX2O60902 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SHOX2O60902 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SHOX2O60902 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SHOX2O60902 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
SHOX2O60902 BDP1P-201ENST00000582658 1990 ntBASIC4.44□□□□□ -1.7
SHOX2O60902 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SHOX2O60902 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.43□□□□□ -1.7
SHOX2O60902 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.43□□□□□ -1.7
SHOX2O60902 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SHOX2O60902 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHOX2O60902 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHOX2O60902 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4.43□□□□□ -1.7
SHOX2O60902 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SHOX2O60902 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
SHOX2O60902 RNU6-171P-201ENST00000384354 107 ntBASIC4.43□□□□□ -1.7
SHOX2O60902 RPS16P5-201ENST00000406501 404 ntBASIC4.43□□□□□ -1.7
SHOX2O60902 MIR1286-201ENST00000408112 78 ntBASIC4.43□□□□□ -1.7
SHOX2O60902 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SHOX2O60902 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.43□□□□□ -1.7
SHOX2O60902 AC097523.2-201ENST00000435551 652 ntBASIC4.43□□□□□ -1.7
SHOX2O60902 PSMD10P3-201ENST00000437000 448 ntBASIC4.43□□□□□ -1.7
SHOX2O60902 AC239809.1-201ENST00000450470 217 ntBASIC4.43□□□□□ -1.7
SHOX2O60902 RN7SL172P-201ENST00000460535 303 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms