Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AL162388.1-201ENST00000450912 352 ntBASIC3.42□□□□□ -1.86
SSSCA1O60232 RN7SL205P-201ENST00000490174 284 ntBASIC3.42□□□□□ -1.86
SSSCA1O60232 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.42□□□□□ -1.86
SSSCA1O60232 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
SSSCA1O60232 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC3.42□□□□□ -1.86
SSSCA1O60232 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC3.42□□□□□ -1.86
SSSCA1O60232 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.42□□□□□ -1.86
SSSCA1O60232 OR5M2P-201ENST00000529003 936 ntBASIC3.42□□□□□ -1.86
SSSCA1O60232 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.42□□□□□ -1.86
SSSCA1O60232 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC3.42□□□□□ -1.86
SSSCA1O60232 AC007225.2-201ENST00000562529 256 ntBASIC3.42□□□□□ -1.86
SSSCA1O60232 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC3.42□□□□□ -1.86
SSSCA1O60232 AP002884.5-201ENST00000595053 1132 ntBASIC3.42□□□□□ -1.86
SSSCA1O60232 AC008536.1-201ENST00000602872 669 ntBASIC3.42□□□□□ -1.86
SSSCA1O60232 AC079587.1-201ENST00000603846 277 ntBASIC3.42□□□□□ -1.86
SSSCA1O60232 MIR486-1-201ENST00000612171 68 ntBASIC3.42□□□□□ -1.86
SSSCA1O60232 AC087385.3-201ENST00000620477 187 ntBASIC3.42□□□□□ -1.86
SSSCA1O60232 AC015722.2-201ENST00000622210 551 ntBASIC3.42□□□□□ -1.86
SSSCA1O60232 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC3.42□□□□□ -1.86
SSSCA1O60232 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SSSCA1O60232 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.42□□□□□ -1.86
SSSCA1O60232 AC093535.2-201ENST00000624769 2326 ntBASIC3.42□□□□□ -1.86
SSSCA1O60232 AC107027.3-201ENST00000565095 3473 ntBASIC3.42□□□□□ -1.86
SSSCA1O60232 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
SSSCA1O60232 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SSSCA1O60232 AC092162.3-201ENST00000624511 1624 ntBASIC3.41□□□□□ -1.86
SSSCA1O60232 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SSSCA1O60232 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SSSCA1O60232 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.41□□□□□ -1.86
SSSCA1O60232 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.41□□□□□ -1.86
SSSCA1O60232 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SSSCA1O60232 RNA5SP322-201ENST00000363617 119 ntBASIC3.41□□□□□ -1.86
SSSCA1O60232 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
SSSCA1O60232 RN7SKP206-201ENST00000410823 293 ntBASIC3.41□□□□□ -1.86
SSSCA1O60232 RAC1P3-201ENST00000416129 580 ntBASIC3.41□□□□□ -1.86
SSSCA1O60232 CHEK2P5-201ENST00000423877 246 ntBASIC3.41□□□□□ -1.86
SSSCA1O60232 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.41□□□□□ -1.86
SSSCA1O60232 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC3.41□□□□□ -1.86
SSSCA1O60232 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.41□□□□□ -1.86
SSSCA1O60232 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.41□□□□□ -1.86
SSSCA1O60232 AL356535.1-201ENST00000440335 398 ntBASIC3.41□□□□□ -1.86
SSSCA1O60232 VN1R25P-201ENST00000443385 738 ntBASIC3.41□□□□□ -1.86
SSSCA1O60232 EEF1B2P5-201ENST00000444820 548 ntBASIC3.41□□□□□ -1.86
SSSCA1O60232 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC3.41□□□□□ -1.86
SSSCA1O60232 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SSSCA1O60232 VN1R40P-201ENST00000455196 941 ntBASIC3.41□□□□□ -1.86
SSSCA1O60232 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC3.41□□□□□ -1.86
SSSCA1O60232 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
SSSCA1O60232 RPL7P16-201ENST00000479738 738 ntBASIC3.41□□□□□ -1.86
SSSCA1O60232 AC008953.1-201ENST00000497334 318 ntBASIC3.41□□□□□ -1.86
SSSCA1O60232 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC3.41□□□□□ -1.86
SSSCA1O60232 PGBD4P4-201ENST00000509673 613 ntBASIC3.41□□□□□ -1.86
SSSCA1O60232 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC3.41□□□□□ -1.86
SSSCA1O60232 AC010342.1-201ENST00000514047 877 ntBASIC3.41□□□□□ -1.86
SSSCA1O60232 RNA5SP228-201ENST00000516232 133 ntBASIC3.41□□□□□ -1.86
SSSCA1O60232 RNU6ATAC24P-201ENST00000516811 135 ntBASIC3.41□□□□□ -1.86
SSSCA1O60232 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.41□□□□□ -1.86
SSSCA1O60232 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC3.41□□□□□ -1.86
SSSCA1O60232 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.41□□□□□ -1.86
SSSCA1O60232 AP001781.1-201ENST00000530977 207 ntBASIC3.41□□□□□ -1.86
SSSCA1O60232 AP006289.1-201ENST00000538089 277 ntBASIC3.41□□□□□ -1.86
SSSCA1O60232 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SSSCA1O60232 AC008126.1-201ENST00000549019 480 ntBASIC3.41□□□□□ -1.86
SSSCA1O60232 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC3.41□□□□□ -1.86
SSSCA1O60232 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.41□□□□□ -1.86
SSSCA1O60232 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC3.41□□□□□ -1.86
SSSCA1O60232 AL354984.3-201ENST00000604803 325 ntBASIC3.41□□□□□ -1.86
SSSCA1O60232 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC3.41□□□□□ -1.86
SSSCA1O60232 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.41□□□□□ -1.86
SSSCA1O60232 AP002967.1-201ENST00000624203 539 ntBASIC3.41□□□□□ -1.86
SSSCA1O60232 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC3.41□□□□□ -1.86
SSSCA1O60232 AL773545.4-201ENST00000637262 310 ntBASIC3.41□□□□□ -1.86
SSSCA1O60232 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.41□□□□□ -1.86
SSSCA1O60232 AL513478.4-201ENST00000641636 310 ntBASIC3.41□□□□□ -1.86
SSSCA1O60232 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
SSSCA1O60232 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
SSSCA1O60232 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.41□□□□□ -1.86
SSSCA1O60232 BDP1P-201ENST00000582658 1990 ntBASIC3.41□□□□□ -1.86
SSSCA1O60232 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.41□□□□□ -1.86
SSSCA1O60232 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC3.41□□□□□ -1.86
SSSCA1O60232 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SSSCA1O60232 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SSSCA1O60232 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.4□□□□□ -1.86
SSSCA1O60232 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
SSSCA1O60232 AC010300.1-201ENST00000600671 5134 ntBASIC3.4□□□□□ -1.86
SSSCA1O60232 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
SSSCA1O60232 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SSSCA1O60232 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
SSSCA1O60232 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SSSCA1O60232 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.4□□□□□ -1.87
SSSCA1O60232 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SSSCA1O60232 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.4□□□□□ -1.87
SSSCA1O60232 AL355433.1-201ENST00000422804 300 ntBASIC3.4□□□□□ -1.87
SSSCA1O60232 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC3.4□□□□□ -1.87
SSSCA1O60232 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SSSCA1O60232 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SSSCA1O60232 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC3.4□□□□□ -1.87
SSSCA1O60232 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC3.4□□□□□ -1.87
SSSCA1O60232 YWHAQP9-201ENST00000445891 512 ntBASIC3.4□□□□□ -1.87
SSSCA1O60232 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms