Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.3□□□□□ -1.56
PROM1O43490 DEFB131E-202ENST00000602581 683 ntBASIC5.3□□□□□ -1.56
PROM1O43490 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.3□□□□□ -1.56
PROM1O43490 AC023813.4-201ENST00000607580 580 ntBASIC5.3□□□□□ -1.56
PROM1O43490 AC105227.2-201ENST00000615075 605 ntBASIC5.3□□□□□ -1.56
PROM1O43490 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC5.3□□□□□ -1.56
PROM1O43490 AC079248.2-201ENST00000623779 326 ntBASIC5.3□□□□□ -1.56
PROM1O43490 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
PROM1O43490 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PROM1O43490 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.3□□□□□ -1.56
PROM1O43490 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.3□□□□□ -1.56
PROM1O43490 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
PROM1O43490 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PROM1O43490 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PROM1O43490 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PROM1O43490 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
PROM1O43490 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PROM1O43490 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.3□□□□□ -1.56
PROM1O43490 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.29□□□□□ -1.56
PROM1O43490 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.29□□□□□ -1.56
PROM1O43490 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PROM1O43490 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.29□□□□□ -1.56
PROM1O43490 ZNF542P-204ENST00000482727 1305 ntBASIC5.29□□□□□ -1.56
PROM1O43490 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
PROM1O43490 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.29□□□□□ -1.56
PROM1O43490 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PROM1O43490 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
PROM1O43490 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
PROM1O43490 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PROM1O43490 RNU6-353P-201ENST00000364266 108 ntBASIC5.29□□□□□ -1.56
PROM1O43490 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.29□□□□□ -1.56
PROM1O43490 Y_RNA.465-201ENST00000384293 102 ntBASIC5.29□□□□□ -1.56
PROM1O43490 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
PROM1O43490 SNORA40.2-201ENST00000390847 128 ntBASIC5.29□□□□□ -1.56
PROM1O43490 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
PROM1O43490 AC010153.1-201ENST00000432862 727 ntBASIC5.29□□□□□ -1.56
PROM1O43490 MTND1P32-201ENST00000433043 938 ntBASIC5.29□□□□□ -1.56
PROM1O43490 SUMO2P3-201ENST00000438311 288 ntBASIC5.29□□□□□ -1.56
PROM1O43490 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.29□□□□□ -1.56
PROM1O43490 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.29□□□□□ -1.56
PROM1O43490 AL450996.1-201ENST00000445574 1202 ntBASIC5.29□□□□□ -1.56
PROM1O43490 GAPDHP14-201ENST00000450472 937 ntBASIC5.29□□□□□ -1.56
PROM1O43490 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC5.29□□□□□ -1.56
PROM1O43490 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC5.29□□□□□ -1.56
PROM1O43490 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.29□□□□□ -1.56
PROM1O43490 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
PROM1O43490 LINC00888-204ENST00000487386 421 ntBASIC5.29□□□□□ -1.56
PROM1O43490 NAA50-206ENST00000493454 964 ntTSL 2 BASIC5.29□□□□□ -1.56
PROM1O43490 EIF3LP3-201ENST00000495197 822 ntBASIC5.29□□□□□ -1.56
PROM1O43490 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC5.29□□□□□ -1.56
PROM1O43490 AC084024.2-201ENST00000503480 791 ntBASIC5.29□□□□□ -1.56
PROM1O43490 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.29□□□□□ -1.56
PROM1O43490 AC091860.1-201ENST00000505723 432 ntBASIC5.29□□□□□ -1.56
PROM1O43490 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.29□□□□□ -1.56
PROM1O43490 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.29□□□□□ -1.56
PROM1O43490 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC5.29□□□□□ -1.56
PROM1O43490 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PROM1O43490 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.29□□□□□ -1.56
PROM1O43490 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC5.29□□□□□ -1.56
PROM1O43490 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.29□□□□□ -1.56
PROM1O43490 AC087465.1-201ENST00000560574 245 ntBASIC5.29□□□□□ -1.56
PROM1O43490 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.29□□□□□ -1.56
PROM1O43490 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.29□□□□□ -1.56
PROM1O43490 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC5.29□□□□□ -1.56
PROM1O43490 H3F3BP2-201ENST00000583907 357 ntBASIC5.29□□□□□ -1.56
PROM1O43490 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.29□□□□□ -1.56
PROM1O43490 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.29□□□□□ -1.56
PROM1O43490 Z69908.1-201ENST00000622603 247 ntBASIC5.29□□□□□ -1.56
PROM1O43490 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.29□□□□□ -1.56
PROM1O43490 LINC01808-202ENST00000641680 1116 ntBASIC5.29□□□□□ -1.56
PROM1O43490 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PROM1O43490 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.29□□□□□ -1.56
PROM1O43490 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
PROM1O43490 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PROM1O43490 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PROM1O43490 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.29□□□□□ -1.56
PROM1O43490 MAPK10-328ENST00000641553 4009 ntBASIC5.29□□□□□ -1.56
PROM1O43490 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.29□□□□□ -1.56
PROM1O43490 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
PROM1O43490 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PROM1O43490 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PROM1O43490 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
PROM1O43490 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PROM1O43490 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PROM1O43490 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.28□□□□□ -1.56
PROM1O43490 AC107027.3-201ENST00000565095 3473 ntBASIC5.28□□□□□ -1.56
PROM1O43490 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PROM1O43490 AC092376.2-201ENST00000622621 4116 ntBASIC5.28□□□□□ -1.56
PROM1O43490 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PROM1O43490 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PROM1O43490 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.28□□□□□ -1.56
PROM1O43490 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PROM1O43490 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PROM1O43490 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
PROM1O43490 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PROM1O43490 RNA5SP46-201ENST00000362370 120 ntBASIC5.28□□□□□ -1.56
PROM1O43490 RN7SKP145-201ENST00000363291 303 ntBASIC5.28□□□□□ -1.56
PROM1O43490 RNU1-74P-201ENST00000384108 171 ntBASIC5.28□□□□□ -1.56
PROM1O43490 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PROM1O43490 AL035419.1-201ENST00000397037 564 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms