Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXA3O43365 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HOXA3O43365 Y_RNA.390-201ENST00000383932 102 ntBASIC5.02□□□□□ -1.61
HOXA3O43365 RNU6-225P-201ENST00000384613 103 ntBASIC5.02□□□□□ -1.61
HOXA3O43365 RNU6-297P-201ENST00000384636 107 ntBASIC5.02□□□□□ -1.61
HOXA3O43365 SNORA40.3-201ENST00000390964 122 ntBASIC5.02□□□□□ -1.61
HOXA3O43365 RPL17P50-201ENST00000396131 546 ntBASIC5.02□□□□□ -1.61
HOXA3O43365 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.02□□□□□ -1.61
HOXA3O43365 HMGB3P7-201ENST00000400214 611 ntBASIC5.02□□□□□ -1.61
HOXA3O43365 RPS3AP23-201ENST00000401762 784 ntBASIC5.02□□□□□ -1.61
HOXA3O43365 HMGN1P14-201ENST00000412459 517 ntBASIC5.02□□□□□ -1.61
HOXA3O43365 HMGB1P11-201ENST00000413899 637 ntBASIC5.02□□□□□ -1.61
HOXA3O43365 AL713922.1-201ENST00000416477 747 ntBASIC5.02□□□□□ -1.61
HOXA3O43365 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.02□□□□□ -1.61
HOXA3O43365 TMBIM7P-201ENST00000418074 855 ntBASIC5.02□□□□□ -1.61
HOXA3O43365 AL953862.1-201ENST00000423016 168 ntBASIC5.02□□□□□ -1.61
HOXA3O43365 NIPA2P1-201ENST00000426223 976 ntBASIC5.02□□□□□ -1.61
HOXA3O43365 VDAC1P6-201ENST00000430062 855 ntBASIC5.02□□□□□ -1.61
HOXA3O43365 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.02□□□□□ -1.61
HOXA3O43365 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.02□□□□□ -1.61
HOXA3O43365 OR3D1P-201ENST00000438288 955 ntBASIC5.02□□□□□ -1.61
HOXA3O43365 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXA3O43365 RAB11AP1-201ENST00000442978 646 ntBASIC5.02□□□□□ -1.61
HOXA3O43365 AC244505.5-201ENST00000443639 207 ntBASIC5.02□□□□□ -1.61
HOXA3O43365 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.02□□□□□ -1.61
HOXA3O43365 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC5.02□□□□□ -1.61
HOXA3O43365 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HOXA3O43365 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC5.02□□□□□ -1.61
HOXA3O43365 AC002553.3-201ENST00000453002 341 ntBASIC5.02□□□□□ -1.61
HOXA3O43365 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.02□□□□□ -1.61
HOXA3O43365 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC5.02□□□□□ -1.61
HOXA3O43365 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.02□□□□□ -1.61
HOXA3O43365 ACA64.1-201ENST00000459171 127 ntBASIC5.02□□□□□ -1.61
HOXA3O43365 RPL31P58-201ENST00000469001 379 ntBASIC5.02□□□□□ -1.61
HOXA3O43365 OR4G11P-201ENST00000492842 939 ntBASIC5.02□□□□□ -1.61
HOXA3O43365 RPL7P24-201ENST00000493052 752 ntBASIC5.02□□□□□ -1.61
HOXA3O43365 AC105252.1-201ENST00000503089 286 ntBASIC5.02□□□□□ -1.61
HOXA3O43365 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HOXA3O43365 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXA3O43365 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC5.02□□□□□ -1.61
HOXA3O43365 RNA5SP340-201ENST00000517132 107 ntBASIC5.02□□□□□ -1.61
HOXA3O43365 AC060775.1-201ENST00000518241 520 ntBASIC5.02□□□□□ -1.61
HOXA3O43365 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.02□□□□□ -1.61
HOXA3O43365 MTND4LP18-201ENST00000526864 291 ntBASIC5.02□□□□□ -1.61
HOXA3O43365 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.02□□□□□ -1.61
HOXA3O43365 CBX3P7-201ENST00000532876 502 ntBASIC5.02□□□□□ -1.61
HOXA3O43365 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.02□□□□□ -1.61
HOXA3O43365 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXA3O43365 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC5.02□□□□□ -1.61
HOXA3O43365 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.02□□□□□ -1.61
HOXA3O43365 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC5.02□□□□□ -1.61
HOXA3O43365 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HOXA3O43365 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HOXA3O43365 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.02□□□□□ -1.61
HOXA3O43365 AC115286.1-201ENST00000604298 434 ntBASIC5.02□□□□□ -1.61
HOXA3O43365 AP000860.1-201ENST00000605250 559 ntBASIC5.02□□□□□ -1.61
HOXA3O43365 LARP7P1-201ENST00000605576 316 ntBASIC5.02□□□□□ -1.61
HOXA3O43365 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.02□□□□□ -1.61
HOXA3O43365 AL008723.3-201ENST00000608926 449 ntBASIC5.02□□□□□ -1.61
HOXA3O43365 AC008115.3-201ENST00000614874 549 ntBASIC5.02□□□□□ -1.61
HOXA3O43365 AL445647.2-201ENST00000615170 130 ntBASIC5.02□□□□□ -1.61
HOXA3O43365 AC007014.2-201ENST00000615581 479 ntBASIC5.02□□□□□ -1.61
HOXA3O43365 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXA3O43365 AL356321.1-201ENST00000621360 228 ntBASIC5.02□□□□□ -1.61
HOXA3O43365 AC231657.1-201ENST00000624313 397 ntBASIC5.02□□□□□ -1.61
HOXA3O43365 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.02□□□□□ -1.61
HOXA3O43365 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXA3O43365 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXA3O43365 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXA3O43365 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC5.02□□□□□ -1.61
HOXA3O43365 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HOXA3O43365 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
HOXA3O43365 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HOXA3O43365 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.02□□□□□ -1.61
HOXA3O43365 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.02□□□□□ -1.61
HOXA3O43365 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HOXA3O43365 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXA3O43365 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.02□□□□□ -1.61
HOXA3O43365 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HOXA3O43365 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
HOXA3O43365 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
HOXA3O43365 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
HOXA3O43365 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HOXA3O43365 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.01□□□□□ -1.61
HOXA3O43365 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
HOXA3O43365 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.01□□□□□ -1.61
HOXA3O43365 AC011455.2-201ENST00000599320 3336 ntBASIC5.01□□□□□ -1.61
HOXA3O43365 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HOXA3O43365 AC073544.1-201ENST00000600110 1595 ntBASIC5.01□□□□□ -1.61
HOXA3O43365 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.01□□□□□ -1.61
HOXA3O43365 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.01□□□□□ -1.61
HOXA3O43365 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HOXA3O43365 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
HOXA3O43365 SNORA70.9-201ENST00000384370 135 ntBASIC5.01□□□□□ -1.61
HOXA3O43365 RNU6-1151P-201ENST00000384684 107 ntBASIC5.01□□□□□ -1.61
HOXA3O43365 MIR181A1-201ENST00000385026 110 ntBASIC5.01□□□□□ -1.61
HOXA3O43365 AL050335.1-201ENST00000396909 869 ntBASIC5.01□□□□□ -1.61
HOXA3O43365 AC025750.1-201ENST00000399891 379 ntBASIC5.01□□□□□ -1.61
HOXA3O43365 RPS24P12-201ENST00000402084 394 ntBASIC5.01□□□□□ -1.61
HOXA3O43365 RPS3AP24-201ENST00000407896 734 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms