Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SMIM28A0A1B0GU29 SNORA70C-201ENST00000384538 135 ntBASIC4.67□□□□□ -1.66
SMIM28A0A1B0GU29 AC240504.1-201ENST00000395709 845 ntBASIC4.67□□□□□ -1.66
SMIM28A0A1B0GU29 AL161909.1-201ENST00000397390 712 ntBASIC4.67□□□□□ -1.66
SMIM28A0A1B0GU29 RPL6P29-201ENST00000414863 865 ntBASIC4.67□□□□□ -1.66
SMIM28A0A1B0GU29 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.67□□□□□ -1.66
SMIM28A0A1B0GU29 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.67□□□□□ -1.66
SMIM28A0A1B0GU29 RAB9AP5-201ENST00000437794 597 ntBASIC4.67□□□□□ -1.66
SMIM28A0A1B0GU29 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.67□□□□□ -1.66
SMIM28A0A1B0GU29 RAB9AP2-201ENST00000443911 597 ntBASIC4.67□□□□□ -1.66
SMIM28A0A1B0GU29 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.67□□□□□ -1.66
SMIM28A0A1B0GU29 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.67□□□□□ -1.66
SMIM28A0A1B0GU29 RN7SL41P-201ENST00000476144 297 ntBASIC4.67□□□□□ -1.66
SMIM28A0A1B0GU29 AC016687.1-201ENST00000482574 353 ntBASIC4.67□□□□□ -1.66
SMIM28A0A1B0GU29 AC108022.1-201ENST00000493466 478 ntBASIC4.67□□□□□ -1.66
SMIM28A0A1B0GU29 AC010374.1-201ENST00000503762 1237 ntBASIC4.67□□□□□ -1.66
SMIM28A0A1B0GU29 AC147055.1-201ENST00000509261 750 ntBASIC4.67□□□□□ -1.66
SMIM28A0A1B0GU29 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.67□□□□□ -1.66
SMIM28A0A1B0GU29 TOMM20P2-201ENST00000540082 421 ntBASIC4.67□□□□□ -1.66
SMIM28A0A1B0GU29 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.67□□□□□ -1.66
SMIM28A0A1B0GU29 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.67□□□□□ -1.66
SMIM28A0A1B0GU29 RPL23AP97-201ENST00000568955 471 ntBASIC4.67□□□□□ -1.66
SMIM28A0A1B0GU29 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.67□□□□□ -1.66
SMIM28A0A1B0GU29 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC4.67□□□□□ -1.66
SMIM28A0A1B0GU29 AC009704.2-201ENST00000618739 483 ntBASIC4.67□□□□□ -1.66
SMIM28A0A1B0GU29 AC007546.1-201ENST00000619452 559 ntBASIC4.67□□□□□ -1.66
SMIM28A0A1B0GU29 AC005086.4-201ENST00000623065 213 ntBASIC4.67□□□□□ -1.66
SMIM28A0A1B0GU29 AL445363.3-201ENST00000623080 671 ntBASIC4.67□□□□□ -1.66
SMIM28A0A1B0GU29 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SMIM28A0A1B0GU29 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SMIM28A0A1B0GU29 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SMIM28A0A1B0GU29 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.67□□□□□ -1.66
SMIM28A0A1B0GU29 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
SMIM28A0A1B0GU29 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.67□□□□□ -1.66
SMIM28A0A1B0GU29 AC245100.2-201ENST00000454544 1679 ntBASIC4.67□□□□□ -1.66
SMIM28A0A1B0GU29 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SMIM28A0A1B0GU29 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.67□□□□□ -1.66
SMIM28A0A1B0GU29 AC010300.1-201ENST00000600671 5134 ntBASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 TCP11X1-202ENST00000622971 1372 ntBASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 THAP12P8-201ENST00000447914 2115 ntBASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 AL121657.1-201ENST00000327215 531 ntBASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 RNU1-44P-201ENST00000384453 163 ntBASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 SNORD96B-201ENST00000386148 79 ntBASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 RN7SKP235-201ENST00000410662 305 ntBASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 VDAC1P9-201ENST00000412766 841 ntBASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 OR6C72P-201ENST00000451403 892 ntBASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 RPS20P4-201ENST00000461659 355 ntBASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 RPL7P22-201ENST00000466005 733 ntBASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 AC090013.1-201ENST00000485147 480 ntBASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 MTND3P6-201ENST00000485242 339 ntBASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 RN7SKP21-201ENST00000516503 220 ntBASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 VPS35P1-201ENST00000563400 1518 ntBASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 EOGT-210ENST00000615922 1931 ntBASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.66□□□□□ -1.66
SMIM28A0A1B0GU29 LARP1BP1-201ENST00000506036 1359 ntBASIC4.65□□□□□ -1.66
SMIM28A0A1B0GU29 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
SMIM28A0A1B0GU29 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
SMIM28A0A1B0GU29 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
SMIM28A0A1B0GU29 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SMIM28A0A1B0GU29 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
SMIM28A0A1B0GU29 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC4.65□□□□□ -1.66
SMIM28A0A1B0GU29 RNU1-14P-201ENST00000362759 152 ntBASIC4.65□□□□□ -1.67
SMIM28A0A1B0GU29 RNU6-1331P-201ENST00000363658 106 ntBASIC4.65□□□□□ -1.67
SMIM28A0A1B0GU29 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.65□□□□□ -1.67
SMIM28A0A1B0GU29 AL078604.1-201ENST00000404609 466 ntBASIC4.65□□□□□ -1.67
SMIM28A0A1B0GU29 AL356967.1-201ENST00000406305 431 ntBASIC4.65□□□□□ -1.67
SMIM28A0A1B0GU29 RNA5SP36-201ENST00000410197 133 ntBASIC4.65□□□□□ -1.67
SMIM28A0A1B0GU29 RN7SKP167-201ENST00000411047 285 ntBASIC4.65□□□□□ -1.67
SMIM28A0A1B0GU29 RFESDP1-201ENST00000422350 461 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 164.4 ms