Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 RN7SKP276-201ENST00000516242 268 ntBASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 RNU6-709P-201ENST00000517257 104 ntBASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 C1DP5-201ENST00000525775 383 ntBASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 AC018754.1-201ENST00000607486 925 ntBASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SNX9Q9Y5X1 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 Z95327.2-201ENST00000414579 1873 ntBASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 AC017079.1-201ENST00000333650 415 ntBASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 MIR122-201ENST00000385044 85 ntBASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 VDAC2P1-201ENST00000399358 958 ntBASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 AL136131.1-201ENST00000406079 803 ntBASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 STAT4-203ENST00000409995 709 ntTSL 5 BASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 AC069282.1-201ENST00000411911 526 ntBASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 RANP4-201ENST00000413361 655 ntBASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 AL606490.7-201ENST00000433136 191 ntBASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 RPS17P8-201ENST00000434525 335 ntBASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 AL512661.1-201ENST00000434586 1253 ntBASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 AC245517.2-201ENST00000442890 346 ntBASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 MOB1AP2-201ENST00000446060 614 ntBASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 RPS5P7-201ENST00000456664 608 ntBASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 AC108729.1-201ENST00000487812 947 ntBASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 RPS23P1-201ENST00000491662 432 ntBASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 OR9N1P-202ENST00000494289 481 ntBASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 RNU6-334P-201ENST00000517072 102 ntBASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 BUD31P1-201ENST00000521828 359 ntBASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 MIR4270-201ENST00000581799 70 ntBASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 AC005242.1-201ENST00000585658 438 ntBASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 AL158050.2-201ENST00000605336 568 ntBASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 AC023813.4-201ENST00000607580 580 ntBASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 AC027449.1-201ENST00000608890 407 ntBASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 MIR1264-201ENST00000616374 69 ntBASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 AC015722.2-201ENST00000622210 551 ntBASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 AC012414.7-202ENST00000622705 1090 ntBASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 AC010608.3-201ENST00000625048 527 ntBASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 AL445984.1-201ENST00000637834 659 ntBASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 AC073869.10-201ENST00000642016 354 ntBASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 TLK1P1-201ENST00000456760 2440 ntBASIC5.16□□□□□ -1.58
SNX9Q9Y5X1 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
SNX9Q9Y5X1 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SNX9Q9Y5X1 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
SNX9Q9Y5X1 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.15□□□□□ -1.58
SNX9Q9Y5X1 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.15□□□□□ -1.58
SNX9Q9Y5X1 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
SNX9Q9Y5X1 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SNX9Q9Y5X1 RSU1P3-201ENST00000412878 835 ntBASIC5.15□□□□□ -1.59
SNX9Q9Y5X1 LINC00993-201ENST00000420453 540 ntBASIC5.15□□□□□ -1.59
SNX9Q9Y5X1 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.15□□□□□ -1.59
SNX9Q9Y5X1 AL606517.1-201ENST00000446914 387 ntBASIC5.15□□□□□ -1.59
SNX9Q9Y5X1 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.15□□□□□ -1.59
SNX9Q9Y5X1 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.15□□□□□ -1.59
SNX9Q9Y5X1 AC104971.1-201ENST00000495117 578 ntBASIC5.15□□□□□ -1.59
SNX9Q9Y5X1 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.15□□□□□ -1.59
SNX9Q9Y5X1 NAMPTP2-201ENST00000505629 1115 ntBASIC5.15□□□□□ -1.59
SNX9Q9Y5X1 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC5.15□□□□□ -1.59
SNX9Q9Y5X1 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.15□□□□□ -1.59
SNX9Q9Y5X1 HMGB1P46-201ENST00000520062 610 ntBASIC5.15□□□□□ -1.59
SNX9Q9Y5X1 SOX5P1-201ENST00000524155 1127 ntBASIC5.15□□□□□ -1.59
SNX9Q9Y5X1 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC5.15□□□□□ -1.59
SNX9Q9Y5X1 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SNX9Q9Y5X1 UBTFL9-201ENST00000534504 1148 ntBASIC5.15□□□□□ -1.59
SNX9Q9Y5X1 AC093014.1-201ENST00000548926 724 ntBASIC5.15□□□□□ -1.59
SNX9Q9Y5X1 NOP56P3-201ENST00000549457 385 ntBASIC5.15□□□□□ -1.59
SNX9Q9Y5X1 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms