Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 AC008033.2-201ENST00000542626 177 ntBASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 AC133555.2-201ENST00000550213 292 ntBASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 AC022726.1-201ENST00000587475 207 ntBASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 ELOCP28-201ENST00000590044 317 ntBASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 HMGB2P1-201ENST00000591146 634 ntBASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 AC011487.3-201ENST00000593607 453 ntBASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 AC005520.3-201ENST00000602874 370 ntBASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 AP004372.1-201ENST00000604842 844 ntBASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 COX6CP4-201ENST00000605798 228 ntBASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 AL353600.1-201ENST00000608148 251 ntBASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 AL359757.1-201ENST00000623176 255 ntBASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 AL355480.1-201ENST00000629041 99 ntBASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 IRF5P1-201ENST00000504852 2164 ntBASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 SYT14P1-202ENST00000600441 1448 ntBASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RHBDD3Q9Y3P4 MAPK10-263ENST00000641052 4307 ntBASIC4.1□□□□□ -1.75
RHBDD3Q9Y3P4 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.1□□□□□ -1.75
RHBDD3Q9Y3P4 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RHBDD3Q9Y3P4 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RHBDD3Q9Y3P4 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RHBDD3Q9Y3P4 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
RHBDD3Q9Y3P4 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
RHBDD3Q9Y3P4 RNU1-20P-201ENST00000363314 162 ntBASIC4.1□□□□□ -1.75
RHBDD3Q9Y3P4 U3.30-201ENST00000391308 210 ntBASIC4.1□□□□□ -1.75
RHBDD3Q9Y3P4 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RHBDD3Q9Y3P4 AL080315.1-201ENST00000406055 466 ntBASIC4.1□□□□□ -1.75
RHBDD3Q9Y3P4 AC114755.2-201ENST00000413520 361 ntBASIC4.1□□□□□ -1.75
RHBDD3Q9Y3P4 AL627308.1-201ENST00000435693 821 ntBASIC4.1□□□□□ -1.75
RHBDD3Q9Y3P4 ARL4AP3-201ENST00000441452 574 ntBASIC4.1□□□□□ -1.75
RHBDD3Q9Y3P4 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.1□□□□□ -1.75
RHBDD3Q9Y3P4 AL157827.1-201ENST00000447622 132 ntBASIC4.1□□□□□ -1.75
RHBDD3Q9Y3P4 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.1□□□□□ -1.75
RHBDD3Q9Y3P4 NDUFS5P3-201ENST00000450668 321 ntBASIC4.1□□□□□ -1.75
RHBDD3Q9Y3P4 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.1□□□□□ -1.75
RHBDD3Q9Y3P4 AC108120.2-201ENST00000512973 294 ntBASIC4.1□□□□□ -1.75
RHBDD3Q9Y3P4 BUD31P1-201ENST00000521828 359 ntBASIC4.1□□□□□ -1.75
RHBDD3Q9Y3P4 AC008083.2-201ENST00000546707 476 ntBASIC4.1□□□□□ -1.75
RHBDD3Q9Y3P4 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.1□□□□□ -1.75
RHBDD3Q9Y3P4 RPL21P7-201ENST00000557463 483 ntBASIC4.1□□□□□ -1.75
RHBDD3Q9Y3P4 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.1□□□□□ -1.75
RHBDD3Q9Y3P4 RN7SL802P-201ENST00000577858 299 ntBASIC4.1□□□□□ -1.75
RHBDD3Q9Y3P4 OR7E18P-201ENST00000592589 702 ntBASIC4.1□□□□□ -1.75
RHBDD3Q9Y3P4 HMGB1P51-201ENST00000605166 638 ntBASIC4.1□□□□□ -1.75
RHBDD3Q9Y3P4 AL391834.1-201ENST00000609609 560 ntBASIC4.1□□□□□ -1.75
RHBDD3Q9Y3P4 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RHBDD3Q9Y3P4 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.1□□□□□ -1.75
RHBDD3Q9Y3P4 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.1□□□□□ -1.75
RHBDD3Q9Y3P4 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.1□□□□□ -1.75
RHBDD3Q9Y3P4 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.1□□□□□ -1.75
RHBDD3Q9Y3P4 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
RHBDD3Q9Y3P4 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RHBDD3Q9Y3P4 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.1□□□□□ -1.75
RHBDD3Q9Y3P4 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.1□□□□□ -1.75
RHBDD3Q9Y3P4 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RHBDD3Q9Y3P4 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RHBDD3Q9Y3P4 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RHBDD3Q9Y3P4 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RHBDD3Q9Y3P4 EOGT-210ENST00000615922 1931 ntBASIC4.09□□□□□ -1.75
RHBDD3Q9Y3P4 DDX18P4-201ENST00000511690 1966 ntBASIC4.09□□□□□ -1.75
RHBDD3Q9Y3P4 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.09□□□□□ -1.75
RHBDD3Q9Y3P4 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
RHBDD3Q9Y3P4 AL356489.2-201ENST00000566968 3528 ntBASIC4.09□□□□□ -1.75
RHBDD3Q9Y3P4 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RHBDD3Q9Y3P4 OR56B2P-201ENST00000317102 954 ntBASIC4.09□□□□□ -1.75
RHBDD3Q9Y3P4 IL6STP1-201ENST00000346911 1020 ntBASIC4.09□□□□□ -1.75
RHBDD3Q9Y3P4 RN7SKP167-201ENST00000411047 285 ntBASIC4.09□□□□□ -1.75
RHBDD3Q9Y3P4 AC013404.1-201ENST00000413068 249 ntBASIC4.09□□□□□ -1.75
RHBDD3Q9Y3P4 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.09□□□□□ -1.75
RHBDD3Q9Y3P4 CYCSP10-201ENST00000417973 294 ntBASIC4.09□□□□□ -1.75
RHBDD3Q9Y3P4 DPY19L1P2-201ENST00000426647 915 ntBASIC4.09□□□□□ -1.75
RHBDD3Q9Y3P4 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.09□□□□□ -1.75
RHBDD3Q9Y3P4 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.09□□□□□ -1.75
RHBDD3Q9Y3P4 OR2B7P-201ENST00000429302 934 ntBASIC4.09□□□□□ -1.75
RHBDD3Q9Y3P4 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.09□□□□□ -1.75
RHBDD3Q9Y3P4 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.09□□□□□ -1.75
RHBDD3Q9Y3P4 EEF1A1P1-201ENST00000447052 739 ntBASIC4.09□□□□□ -1.75
RHBDD3Q9Y3P4 OR52J1P-201ENST00000450596 932 ntBASIC4.09□□□□□ -1.75
RHBDD3Q9Y3P4 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.09□□□□□ -1.75
RHBDD3Q9Y3P4 AURKAPS2-201ENST00000454983 333 ntBASIC4.09□□□□□ -1.75
RHBDD3Q9Y3P4 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.09□□□□□ -1.75
RHBDD3Q9Y3P4 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms