Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LRFN1Q9P244 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LRFN1Q9P244 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.11□□□□□ -1.59
LRFN1Q9P244 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LRFN1Q9P244 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.11□□□□□ -1.59
LRFN1Q9P244 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.11□□□□□ -1.59
LRFN1Q9P244 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LRFN1Q9P244 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.11□□□□□ -1.59
LRFN1Q9P244 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.11□□□□□ -1.59
LRFN1Q9P244 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
LRFN1Q9P244 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LRFN1Q9P244 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LRFN1Q9P244 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.1□□□□□ -1.59
LRFN1Q9P244 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
LRFN1Q9P244 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.1□□□□□ -1.59
LRFN1Q9P244 AC144833.1-201ENST00000567953 4089 ntBASIC5.1□□□□□ -1.59
LRFN1Q9P244 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.1□□□□□ -1.59
LRFN1Q9P244 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LRFN1Q9P244 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LRFN1Q9P244 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LRFN1Q9P244 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LRFN1Q9P244 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LRFN1Q9P244 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
LRFN1Q9P244 RNU6-839P-201ENST00000363347 108 ntBASIC5.1□□□□□ -1.59
LRFN1Q9P244 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LRFN1Q9P244 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
LRFN1Q9P244 RNU6-1242P-201ENST00000391052 103 ntBASIC5.1□□□□□ -1.59
LRFN1Q9P244 AL590763.1-201ENST00000398297 1545 ntBASIC5.1□□□□□ -1.59
LRFN1Q9P244 ERHP2-201ENST00000402323 299 ntBASIC5.1□□□□□ -1.59
LRFN1Q9P244 PRELID3BP11-201ENST00000414230 479 ntBASIC5.1□□□□□ -1.59
LRFN1Q9P244 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.1□□□□□ -1.59
LRFN1Q9P244 RPL22P18-201ENST00000417197 377 ntBASIC5.1□□□□□ -1.59
LRFN1Q9P244 RNF10P1-201ENST00000418589 369 ntBASIC5.1□□□□□ -1.59
LRFN1Q9P244 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.1□□□□□ -1.59
LRFN1Q9P244 IPMKP1-201ENST00000425988 855 ntBASIC5.1□□□□□ -1.59
LRFN1Q9P244 AL590399.2-201ENST00000427536 309 ntBASIC5.1□□□□□ -1.59
LRFN1Q9P244 MOB1AP1-201ENST00000430903 535 ntBASIC5.1□□□□□ -1.59
LRFN1Q9P244 RPL7L1P9-201ENST00000431298 745 ntBASIC5.1□□□□□ -1.59
LRFN1Q9P244 CYCSP6-201ENST00000434498 302 ntBASIC5.1□□□□□ -1.59
LRFN1Q9P244 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.1□□□□□ -1.59
LRFN1Q9P244 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC5.1□□□□□ -1.59
LRFN1Q9P244 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
LRFN1Q9P244 AC079776.3-201ENST00000450665 370 ntBASIC5.1□□□□□ -1.59
LRFN1Q9P244 ZNF736P8Y-201ENST00000451913 669 ntBASIC5.1□□□□□ -1.59
LRFN1Q9P244 COPS8P2-201ENST00000473228 627 ntBASIC5.1□□□□□ -1.59
LRFN1Q9P244 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LRFN1Q9P244 UBA52P7-201ENST00000486088 380 ntBASIC5.1□□□□□ -1.59
LRFN1Q9P244 RN7SL30P-201ENST00000488416 306 ntBASIC5.1□□□□□ -1.59
LRFN1Q9P244 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.1□□□□□ -1.59
LRFN1Q9P244 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.1□□□□□ -1.59
LRFN1Q9P244 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.1□□□□□ -1.59
LRFN1Q9P244 MTND4LP2-201ENST00000502312 285 ntBASIC5.1□□□□□ -1.59
LRFN1Q9P244 AC048346.1-201ENST00000510247 144 ntBASIC5.1□□□□□ -1.59
LRFN1Q9P244 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.1□□□□□ -1.59
LRFN1Q9P244 RN7SKP96-201ENST00000516948 297 ntBASIC5.1□□□□□ -1.59
LRFN1Q9P244 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.1□□□□□ -1.59
LRFN1Q9P244 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.1□□□□□ -1.59
LRFN1Q9P244 AP001317.1-201ENST00000531194 960 ntBASIC5.1□□□□□ -1.59
LRFN1Q9P244 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.1□□□□□ -1.59
LRFN1Q9P244 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.1□□□□□ -1.59
LRFN1Q9P244 SERPINE4P-201ENST00000554978 281 ntBASIC5.1□□□□□ -1.59
LRFN1Q9P244 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.1□□□□□ -1.59
LRFN1Q9P244 MTND4P33-201ENST00000556706 766 ntBASIC5.1□□□□□ -1.59
LRFN1Q9P244 AC023813.2-201ENST00000564321 469 ntBASIC5.1□□□□□ -1.59
LRFN1Q9P244 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.1□□□□□ -1.59
LRFN1Q9P244 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.1□□□□□ -1.59
LRFN1Q9P244 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.1□□□□□ -1.59
LRFN1Q9P244 AC017100.2-201ENST00000584628 355 ntBASIC5.1□□□□□ -1.59
LRFN1Q9P244 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.1□□□□□ -1.59
LRFN1Q9P244 AL390816.3-201ENST00000604527 1066 ntBASIC5.1□□□□□ -1.59
LRFN1Q9P244 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.1□□□□□ -1.59
LRFN1Q9P244 AP000255.1-201ENST00000610276 676 ntBASIC5.1□□□□□ -1.59
LRFN1Q9P244 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LRFN1Q9P244 AC140725.3-201ENST00000616193 880 ntBASIC5.1□□□□□ -1.59
LRFN1Q9P244 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.1□□□□□ -1.59
LRFN1Q9P244 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.1□□□□□ -1.59
LRFN1Q9P244 AC124312.6-202ENST00000623624 418 ntBASIC5.1□□□□□ -1.59
LRFN1Q9P244 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.1□□□□□ -1.59
LRFN1Q9P244 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
LRFN1Q9P244 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.1□□□□□ -1.59
LRFN1Q9P244 OR9K1P-202ENST00000641111 3217 ntBASIC5.1□□□□□ -1.59
LRFN1Q9P244 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
LRFN1Q9P244 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.1□□□□□ -1.59
LRFN1Q9P244 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LRFN1Q9P244 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LRFN1Q9P244 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LRFN1Q9P244 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
LRFN1Q9P244 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
LRFN1Q9P244 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.09□□□□□ -1.59
LRFN1Q9P244 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LRFN1Q9P244 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
LRFN1Q9P244 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
LRFN1Q9P244 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
LRFN1Q9P244 PANDAR-201ENST00000629595 1506 ntBASIC5.09□□□□□ -1.59
LRFN1Q9P244 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LRFN1Q9P244 CYP1D1P-201ENST00000416662 1433 ntBASIC5.09□□□□□ -1.59
LRFN1Q9P244 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.09□□□□□ -1.59
LRFN1Q9P244 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.09□□□□□ -1.59
LRFN1Q9P244 RNU4-28P-201ENST00000364739 141 ntBASIC5.09□□□□□ -1.59
LRFN1Q9P244 RNU6-413P-201ENST00000384115 107 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms