Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.18□□□□□ -1.74
CCDC88CQ9P219 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC88CQ9P219 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC88CQ9P219 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC88CQ9P219 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC88CQ9P219 RNA5SP509-201ENST00000364577 119 ntBASIC4.17□□□□□ -1.74
CCDC88CQ9P219 RNA5SP366-201ENST00000365454 123 ntBASIC4.17□□□□□ -1.74
CCDC88CQ9P219 RNU1-44P-201ENST00000384453 163 ntBASIC4.17□□□□□ -1.74
CCDC88CQ9P219 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC88CQ9P219 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC88CQ9P219 EIF4EP1-201ENST00000422311 642 ntBASIC4.17□□□□□ -1.74
CCDC88CQ9P219 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC88CQ9P219 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC88CQ9P219 AL162591.2-201ENST00000449634 317 ntBASIC4.17□□□□□ -1.74
CCDC88CQ9P219 AC103987.1-201ENST00000473394 348 ntBASIC4.17□□□□□ -1.74
CCDC88CQ9P219 AC006517.1-201ENST00000480485 328 ntBASIC4.17□□□□□ -1.74
CCDC88CQ9P219 IGBP1P5-201ENST00000507524 1000 ntBASIC4.17□□□□□ -1.74
CCDC88CQ9P219 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC88CQ9P219 RNA5SP143-201ENST00000516936 115 ntBASIC4.17□□□□□ -1.74
CCDC88CQ9P219 AC026951.1-201ENST00000559530 2459 ntBASIC4.17□□□□□ -1.74
CCDC88CQ9P219 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC88CQ9P219 MIR1254-2-201ENST00000579553 63 ntBASIC4.17□□□□□ -1.74
CCDC88CQ9P219 AC006116.5-201ENST00000591936 559 ntBASIC4.17□□□□□ -1.74
CCDC88CQ9P219 AC010201.1-201ENST00000605051 540 ntBASIC4.17□□□□□ -1.74
CCDC88CQ9P219 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC88CQ9P219 AC008013.2-202ENST00000637965 364 ntBASIC4.17□□□□□ -1.74
CCDC88CQ9P219 FP325313.1-201ENST00000638228 703 ntBASIC4.17□□□□□ -1.74
CCDC88CQ9P219 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC88CQ9P219 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC88CQ9P219 NXPH1-205ENST00000602349 1953 ntBASIC4.17□□□□□ -1.74
CCDC88CQ9P219 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC88CQ9P219 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CCDC88CQ9P219 SAMMSON-213ENST00000641336 1521 ntBASIC4.17□□□□□ -1.74
CCDC88CQ9P219 MIR331-201ENST00000362302 94 ntBASIC4.17□□□□□ -1.74
CCDC88CQ9P219 SEPT7P8-201ENST00000413308 775 ntBASIC4.17□□□□□ -1.74
CCDC88CQ9P219 SKP1P3-201ENST00000429280 487 ntBASIC4.17□□□□□ -1.74
CCDC88CQ9P219 OR4C10P-201ENST00000434991 931 ntBASIC4.17□□□□□ -1.74
CCDC88CQ9P219 AC092447.2-201ENST00000435487 669 ntBASIC4.17□□□□□ -1.74
CCDC88CQ9P219 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC88CQ9P219 DHFRP3-201ENST00000455595 559 ntBASIC4.17□□□□□ -1.74
CCDC88CQ9P219 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC88CQ9P219 AC010618.1-201ENST00000469924 477 ntBASIC4.17□□□□□ -1.74
CCDC88CQ9P219 AC041039.1-201ENST00000485656 536 ntBASIC4.17□□□□□ -1.74
CCDC88CQ9P219 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC88CQ9P219 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC88CQ9P219 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC88CQ9P219 AC098799.3-201ENST00000506095 438 ntBASIC4.17□□□□□ -1.74
CCDC88CQ9P219 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC88CQ9P219 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC88CQ9P219 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC88CQ9P219 RPL7P50-201ENST00000600588 727 ntBASIC4.17□□□□□ -1.74
CCDC88CQ9P219 AC008638.3-201ENST00000603341 463 ntBASIC4.17□□□□□ -1.74
CCDC88CQ9P219 Z98200.1-201ENST00000607298 470 ntBASIC4.17□□□□□ -1.74
CCDC88CQ9P219 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC88CQ9P219 AL023881.1-201ENST00000621088 301 ntBASIC4.17□□□□□ -1.74
CCDC88CQ9P219 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
CCDC88CQ9P219 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC88CQ9P219 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC88CQ9P219 MAPK10-303ENST00000641324 3959 ntBASIC4.17□□□□□ -1.74
CCDC88CQ9P219 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC88CQ9P219 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
CCDC88CQ9P219 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
CCDC88CQ9P219 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
CCDC88CQ9P219 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC88CQ9P219 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC88CQ9P219 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC88CQ9P219 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC88CQ9P219 RN7SKP199-201ENST00000410325 305 ntBASIC4.16□□□□□ -1.74
CCDC88CQ9P219 RAD23BP1-201ENST00000421404 1227 ntBASIC4.16□□□□□ -1.74
CCDC88CQ9P219 PHBP16-201ENST00000446318 950 ntBASIC4.16□□□□□ -1.74
CCDC88CQ9P219 RPL21P6-201ENST00000479171 504 ntBASIC4.16□□□□□ -1.74
CCDC88CQ9P219 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.16□□□□□ -1.74
CCDC88CQ9P219 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.16□□□□□ -1.74
CCDC88CQ9P219 ARF4P1-201ENST00000605447 541 ntBASIC4.16□□□□□ -1.74
CCDC88CQ9P219 AP005019.3-201ENST00000620418 560 ntBASIC4.16□□□□□ -1.74
CCDC88CQ9P219 AC140113.4-201ENST00000622087 222 ntBASIC4.16□□□□□ -1.74
CCDC88CQ9P219 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC88CQ9P219 AC005332.5-201ENST00000591222 2919 ntBASIC4.16□□□□□ -1.74
CCDC88CQ9P219 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC88CQ9P219 DDX18P4-201ENST00000511690 1966 ntBASIC4.16□□□□□ -1.74
CCDC88CQ9P219 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC88CQ9P219 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
CCDC88CQ9P219 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC88CQ9P219 AL022722.2-201ENST00000402519 180 ntBASIC4.16□□□□□ -1.74
CCDC88CQ9P219 RN7SKP235-201ENST00000410662 305 ntBASIC4.16□□□□□ -1.74
CCDC88CQ9P219 RNA5SP146-201ENST00000410743 123 ntBASIC4.16□□□□□ -1.74
CCDC88CQ9P219 AC009237.10-201ENST00000414112 510 ntBASIC4.16□□□□□ -1.74
CCDC88CQ9P219 RPL6P21-201ENST00000418672 846 ntBASIC4.16□□□□□ -1.74
CCDC88CQ9P219 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.16□□□□□ -1.74
CCDC88CQ9P219 COX6CP15-201ENST00000426313 211 ntBASIC4.16□□□□□ -1.74
CCDC88CQ9P219 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC88CQ9P219 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.16□□□□□ -1.74
CCDC88CQ9P219 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
CCDC88CQ9P219 RPS27AP16-201ENST00000492222 470 ntBASIC4.16□□□□□ -1.74
CCDC88CQ9P219 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.16□□□□□ -1.74
CCDC88CQ9P219 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC88CQ9P219 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC88CQ9P219 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC88CQ9P219 AC116158.1-201ENST00000560231 2129 ntBASIC4.16□□□□□ -1.74
CCDC88CQ9P219 MIR4286-201ENST00000580651 93 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms